| Literature DB >> 17216283 |
S C Collins1, J Luan, A J Thompson, A Daly, R K Semple, S O'Rahilly, N J Wareham, I Barroso.
Abstract
AIMS/HYPOTHESIS: Adiponectin is an adipokine with insulin-sensitising and anti-atherogenic properties. Several reports suggest that genetic variants in the adiponectin gene are associated with circulating levels of adiponectin, insulin sensitivity and type 2 diabetes risk. Recently two receptors for adiponectin have been cloned. Genetic studies have yielded conflicting results on the role of these genes and type 2 diabetes predisposition. In this study we aimed to evaluate the potential role of genetic variation in these genes in syndromes of severe insulin resistance, type 2 diabetes and in related metabolic traits in UK Europid populations.Entities:
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Year: 2007 PMID: 17216283 PMCID: PMC1794135 DOI: 10.1007/s00125-006-0534-7
Source DB: PubMed Journal: Diabetologia ISSN: 0012-186X Impact factor: 10.122
Fig. 1Genomic structure and pair-wise marker LD in ADIPOR1 (a) and ADIPOR2 (b). The location of SNPs identified in this study and/or genotyped is represented along the gene (bold type: SNPs selected for genotyping, and failed or monomorphic SNPs). Exons are represented in boxes (black for coding and open for untranslated). Introns and flanking sequences appear as lines. The pair-wise marker LD measured by r2 statistics is shown below the genomic structures and indicated by the shade of grey blocks (white to black) and the r2 value. a, b, isoforms a and b in ADIPOR2
ADIPOR1 and ADIPOR2 SNP association results with type 2 diabetes
| Gene | SNP | Allele | Cases | Controls | Odds ratio | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1/2 | 11 (%) | 12 (%) | 22 (%) | 11 (%) | 12 (%) | 22 (%) | (95% CI) | ||||||
| rs6666089 | G/A | 378 (47.6) | 340 (42.8) | 76 (9.6) | 536 (46.2) | 525 (45.2) | 100 (8.6) | 1.00 (0.86,1.15) | 0.9601 | 0.750 | |||
| rs1539355 | A/G | 374 (46.6) | 346 (43.1) | 82 (10.2) | 558 (45.9) | 547 (45.0) | 111 (9.1) | 1.02 (0.89,1.18) | 0.7350 | 0.649 | |||
| rs2275738 | C/T | 277 (34.4) | 379 (47.1) | 149 (18.5) | 395 (34.0) | 551 (47.4) | 216 (18.6) | 0.97 (0.85,1.1) | 0.6109 | 0.496 | |||
| IVS3+85 | C/G | 707 (92.1) | 61 (7.9) | 0 (0) | 1046 (92.6) | 82 (7.3) | 2 (0.2) | 1.03 (0.73,1.45) | 0.8721 | 0.654 | |||
| rs2275735 | C/T | 763 (92.0) | 66 (8.0) | 0 (0) | 1152 (93.5) | 79 (6.4) | 1 (0.1) | 1.24 (0.88,1.75) | 0.2239 | 0.228 | |||
| rs1342387 | C/T | 249 (30.4) | 414 (50.5) | 156 (19.0) | 362 (29.5) | 634 (51.7) | 231 (18.8) | 0.96 (0.85,1.1) | 0.5909 | 0.603 | |||
| rs10581 | G/A | 741 (93.8) | 46 (5.8) | 3 (0.4) | 1079 (95.7) | 46 (4.1) | 3 (0.3) | 1.35 (0.92,1.97) | 0.1281 | 0.466 | |||
| rs7539542 | C/G | 373 (47.4) | 336 (42.7) | 78 (9.9) | 554 (46.9) | 510 (43.2) | 117 (9.9) | 1.00 (0.87,1.15) | 0.9566 | 0.193 | |||
| rs2185781 | C/T | 532 (63.6) | 256 (30.6) | 49 (5.9) | 789 (63.8) | 398 (32.2) | 50 (4.0) | 1.08 (0.92,1.26) | 0.3425 | 0.495 | |||
| rs1029629 | A/C | 353 (44.6) | 372 (47.0) | 67 (8.5) | 537 (44.9) | 528 (44.1) | 132 (11.0) | 0.94 (0.81,1.08) | 0.3497 | 0.265 | |||
| rs11061971 | A/T | 228 (28.1) | 409 (50.4) | 174 (21.5) | 349 (29.5) | 589 (49.7) | 246 (20.8) | 1.05 (0.93,1.20) | 0.4394 | 0.092 | |||
| rs4766415 | A/T | 207 (25.6) | 411 (50.7) | 192 (23.7) | 323 (27.1) | 586 (49.2) | 282 (23.7) | 1.04 (0.92,1.19) | 0.5159 | 0.074 | |||
| rs767870 | A/G | 575 (71.3) | 214 (26.5) | 18 (2.2) | 857 (72.3) | 310 (26.1) | 19 (1.6) | 1.08 (0.9,1.3) | 0.3843 | 0.095 | |||
| rs2286384 | G/C | 214 (25.7) | 429 (51.5) | 190 (22.8) | 329 (26.8) | 618 (50.3) | 282 (22.9) | 1.03 (0.9,1.17) | 0.6837 | 0.037* | |||
| rs2286383 | C/T | 237 (28.6) | 418 (50.4) | 174 (21.0) | 368 (30.1) | 602 (49.2) | 253 (20.7) | 1.05 (0.92,1.19) | 0.4598 | 0.068 | |||
| I290 | C/A | 618 (75.2) | 193 (23.5) | 11 (1.3) | 940 (77.9) | 252 (21.0) | 14 (1.2) | 1.18 (0.97,1.44) | 0.0985 | 0.118 | |||
| rs9805042 | C/T | 603 (75.8) | 180 (22.6) | 12 (1.5) | 900 (79.0) | 225 (19.8) | 14 (1.2) | 1.17 (0.96,1.43) | 0.1282 | 0.051 | |||
| rs2286382 | G/A | 791 (94.5) | 45 (5.4) | 1 (0.1) | 1159 (94.2) | 71 (5.8) | 0 (0) | 0.98 (0.67,1.43) | 0.9054 | 0.664 | |||
| rs12342 | C/T | 370 (44.6) | 376 (45.3) | 84 (10.1) | 543 (44.3) | 540 (44.1) | 142 (11.6) | 0.96 (0.84,1.1) | 0.5461 | 0.398 | |||
| rs1044471 | C/T | 227 (27.8) | 420 (51.5) | 169 (20.7) | 334 (27.6) | 592 (49.0) | 282 (23.3) | 0.93 (0.82,1.05) | 0.2500 | 0.115 | |||
| rs2286380 | A/T | 621 (77.0) | 176 (21.8) | 10 (1.2) | 947 (79.0) | 238 (19.8) | 15 (0.0125) | 1.12 (0.91,1.37) | 0.2762 | 0.155 | |||
| rs13219 | T/C | 251 (30.2) | 403 (48.4) | 178 (21.4) | 369 (30.1) | 618 (50.4) | 238 (19.4) | 1.04 (0.91,1.18) | 0.5610 | 0.276 | |||
| rs2286379 | T/C | 259 (31.0) | 399 (47.7) | 178 (21.3) | 376 (30.6) | 614 (50.0) | 239 (19.4) | 1.03 (0.91,1.17) | 0.6427 | 0.269 | |||
| rs3815325 | G/A | 490 (60.6) | 273 (33.7) | 46 (5.7) | 712 (58.7) | 437 (36.0) | 64 (5.3) | 0.96 (0.82,1.11) | 0.5785 | 0.263 | |||
11, homozygous for allele 1, 12, heterozygous, 22, homozygous for allele 2. Genotype counts are shown with frequency (%), odds ratios are shown per allele 2 with significance calculated for the linear trend (p value trend). Homogeneity in results from association between EPIC and Cambridge Case–Control populations was tested (p value homogeneity)
*p values ≤ 0.05