Literature DB >> 17213197

Specificity of the deoxyhypusine hydroxylase-eukaryotic translation initiation factor (eIF5A) interaction: identification of amino acid residues of the enzyme required for binding of its substrate, deoxyhypusine-containing eIF5A.

Kee Ryeon Kang1, Yeon Sook Kim, Edith C Wolff, Myung Hee Park.   

Abstract

Deoxyhypusine hydroxylase (DOHH) is a novel metalloenzyme that catalyzes the final step of the post-translational synthesis of hypusine (Nepsilon-(4-amino-2-hydroxybutyl)lysine) in the eukaryotic translation initiation factor 5A (eIF5A). Hypusine synthesis is unique in that it occurs in only one protein, denoting the strict specificity of the modification enzymes toward the substrate protein. The specificity of the interaction between eIF5A and DOHH was investigated using human eIF5A (eIF5A-1 isoform) and human recombinant DOHH. DOHH displayed a strong preference for binding the deoxyhypusine-containing form of eIF5A, over the eIF5A precursor or the hypusine-containing eIF5A, indicating a role for the deoxyhypusine residue in binding. In addition to the deoxyhypusine residue, a large portion of the eIF5A polypeptide (>20-90 amino acids) is required for effective modification by DOHH. We have identified the amino acid residues of DOHH that are critical for substrate binding by alanine substitution of 36 conserved amino acid residues. Of these, alanine substitution at Glu57, Glu90, Glu208, Glu241, Gly63, or Gly214 caused a severe impairment in eIF5A(Dhp) binding, with a complete loss of binding and activity in the E57A and E208A mutant enzymes. Only aspartate substitution mutants, E57D or E208D, retained partial activity and substrate binding, whereas alanine, glutamine, or asparagine mutants did not. These findings support a proposed model of DOHH-eIF5A binding in which the amino group(s) of the deoxyhypusine side chain of the substrate is primarily anchored by gamma-carboxyl groups of Glu57 and Glu208 at the DOHH active site.

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Year:  2007        PMID: 17213197      PMCID: PMC1852541          DOI: 10.1074/jbc.M607495200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  55 in total

1.  Identification of a soluble protein that stimulates peptide bond synthesis.

Authors:  B R Glick; M C Ganoza
Journal:  Proc Natl Acad Sci U S A       Date:  1975-11       Impact factor: 11.205

2.  Purification and characterization of protein synthesis initiation factors eIF-1, eIF-4C, eIF-4D, and eIF-5 from rabbit reticulocytes.

Authors:  R Benne; M L Brown-Luedi; J W Hershey
Journal:  J Biol Chem       Date:  1978-05-10       Impact factor: 5.157

3.  The biosynthesis of hypusine (N epsilon-(4-amino-2-hydroxybutyl)lysine). Alignment of the butylamine segment and source of the secondary amino nitrogen.

Authors:  M H Park; D J Liberato; A L Yergey; J E Folk
Journal:  J Biol Chem       Date:  1984-10-10       Impact factor: 5.157

4.  Deoxyhypusine hydroxylase is a Fe(II)-dependent, HEAT-repeat enzyme. Identification of amino acid residues critical for Fe(II) binding and catalysis [corrected].

Authors:  Yeon Sook Kim; Kee Ryeon Kang; Edith C Wolff; Jessica K Bell; Peter McPhie; Myung Hee Park
Journal:  J Biol Chem       Date:  2006-03-13       Impact factor: 5.157

5.  Mmd1p, a novel, conserved protein essential for normal mitochondrial morphology and distribution in the fission yeast Schizosaccharomyces pombe.

Authors:  Barbara A Weir; Michael P Yaffe
Journal:  Mol Biol Cell       Date:  2004-02-06       Impact factor: 4.138

Review 6.  FeII/alpha-ketoglutarate-dependent hydroxylases and related enzymes.

Authors:  Robert P Hausinger
Journal:  Crit Rev Biochem Mol Biol       Date:  2004 Jan-Feb       Impact factor: 8.250

Review 7.  High-throughput RNAi in Caenorhabditis elegans: genome-wide screens and functional genomics.

Authors:  Asako Sugimoto
Journal:  Differentiation       Date:  2004-03       Impact factor: 3.880

8.  Identification of hypusine, an unusual amino acid, in a protein from human lymphocytes and of spermidine as its biosynthetic precursor.

Authors:  M H Park; H L Cooper; J E Folk
Journal:  Proc Natl Acad Sci U S A       Date:  1981-05       Impact factor: 11.205

9.  Spermidine but not spermine is essential for hypusine biosynthesis and growth in Saccharomyces cerevisiae: spermine is converted to spermidine in vivo by the FMS1-amine oxidase.

Authors:  Manas K Chattopadhyay; Celia White Tabor; Herbert Tabor
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-14       Impact factor: 11.205

10.  Crystal structure of elongation factor P from Thermus thermophilus HB8.

Authors:  Kyoko Hanawa-Suetsugu; Shun-ichi Sekine; Hiroaki Sakai; Chie Hori-Takemoto; Takaho Terada; Satoru Unzai; Jeremy R H Tame; Seiki Kuramitsu; Mikako Shirouzu; Shigeyuki Yokoyama
Journal:  Proc Natl Acad Sci U S A       Date:  2004-06-21       Impact factor: 11.205

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  14 in total

Review 1.  The hypusine-containing translation factor eIF5A.

Authors:  Thomas E Dever; Erik Gutierrez; Byung-Sik Shin
Journal:  Crit Rev Biochem Mol Biol       Date:  2014-07-17       Impact factor: 8.250

2.  Assay of deoxyhypusine hydroxylase activity.

Authors:  Jong Hwan Park; Edith C Wolff; Myung Hee Park
Journal:  Methods Mol Biol       Date:  2011

Review 3.  Posttranslational synthesis of hypusine: evolutionary progression and specificity of the hypusine modification.

Authors:  E C Wolff; K R Kang; Y S Kim; M H Park
Journal:  Amino Acids       Date:  2007-05-04       Impact factor: 3.520

4.  Evidence for conformational changes in the yeast deoxyhypusine hydroxylase Lia1 upon iron displacement from its active site.

Authors:  Veridiana S P Cano; Francisco Javier Medrano; Myung Hee Park; Sandro R Valentini
Journal:  Amino Acids       Date:  2009-12-03       Impact factor: 3.520

5.  Mutational analyses of human eIF5A-1--identification of amino acid residues critical for eIF5A activity and hypusine modification.

Authors:  Veridiana S P Cano; Geoung A Jeon; Hans E Johansson; C Allen Henderson; Jong-Hwan Park; Sandro R Valentini; John W B Hershey; Myung Hee Park
Journal:  FEBS J       Date:  2007-12-06       Impact factor: 5.542

Review 6.  Hypusine, a polyamine-derived amino acid critical for eukaryotic translation.

Authors:  Myung Hee Park; Edith C Wolff
Journal:  J Biol Chem       Date:  2018-09-26       Impact factor: 5.157

7.  A unique modification of the eukaryotic initiation factor 5A shows the presence of the complete hypusine pathway in Leishmania donovani.

Authors:  Bhavna Chawla; Ravi Ranjan Kumar; Nidhi Tyagi; Gowri Subramanian; N Srinivasan; Myung Hee Park; Rentala Madhubala
Journal:  PLoS One       Date:  2012-03-16       Impact factor: 3.240

8.  Inhibition of HIV-1 gene expression by Ciclopirox and Deferiprone, drugs that prevent hypusination of eukaryotic initiation factor 5A.

Authors:  Mainul Hoque; Hartmut M Hanauske-Abel; Paul Palumbo; Deepti Saxena; Darlene D'Alliessi Gandolfi; Myung Hee Park; Tsafi Pe'ery; Michael B Mathews
Journal:  Retrovirology       Date:  2009-10-13       Impact factor: 4.602

9.  The Drosophila deoxyhypusine hydroxylase homologue nero and its target eIF5A are required for cell growth and the regulation of autophagy.

Authors:  Prajal H Patel; Mauro Costa-Mattioli; Karen L Schulze; Hugo J Bellen
Journal:  J Cell Biol       Date:  2009-06-22       Impact factor: 10.539

10.  A novel mouse model for inhibition of DOHH-mediated hypusine modification reveals a crucial function in embryonic development, proliferation and oncogenic transformation.

Authors:  Henning Sievert; Nora Pällmann; Katharine K Miller; Irm Hermans-Borgmeyer; Simone Venz; Ataman Sendoel; Michael Preukschas; Michaela Schweizer; Steffen Boettcher; P Christoph Janiesch; Thomas Streichert; Reinhard Walther; Michael O Hengartner; Markus G Manz; Tim H Brümmendorf; Carsten Bokemeyer; Melanie Braig; Joachim Hauber; Kent E Duncan; Stefan Balabanov
Journal:  Dis Model Mech       Date:  2014-05-15       Impact factor: 5.758

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