Literature DB >> 17211071

A comparison of SAD and two-wavelength MAD phasing for radiation-damaged Se-MET crystals.

Ana González1.   

Abstract

Although a case has been made that single-wavelength anomalous dispersion (SAD) is the optimal strategy for data collection in the presence of radiation damage, two-wavelength MAD experiments at the inflection and a high-energy remote point of the absorption edge have been shown to be a potentially successful alternative method. In order to further investigate the performance of both data collection strategies, a comparison of SAD and MAD phasing was carried out for increasingly damaged data sets from three different seleno-methionine protein samples collected under similar experimental conditions. In all but one example the MAD phases appeared to be less affected than SAD phases with increasing exposure to X-rays, and had a better overall success rate, indicating that this method should be given serious consideration when dealing with radiation-sensitive crystals. Simultaneous data collection in wedges at all wavelengths seems to be a very important factor in the success of MAD experiments; the decreased absorbed dose resulting from eschewing data collection at the maximum f '' wavelength may play a less important role. Specific radiation damage to the selenium atoms is found to be a minor effect compared with the effect on the anomalous dispersion signal, although potentially large enough to be a useful contribution to phasing in both SAD and MAD experiments.

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Year:  2006        PMID: 17211071     DOI: 10.1107/S0909049506041045

Source DB:  PubMed          Journal:  J Synchrotron Radiat        ISSN: 0909-0495            Impact factor:   2.616


  3 in total

1.  Radiation damage in macromolecular crystallography: what is it and why should we care?

Authors:  Elspeth F Garman
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

2.  Development of a dose-limiting data collection strategy for serial synchrotron rotation crystallography.

Authors:  Kazuya Hasegawa; Keitaro Yamashita; Tomohiro Murai; Nipawan Nuemket; Kunio Hirata; Go Ueno; Hideo Ago; Toru Nakatsu; Takashi Kumasaka; Masaki Yamamoto
Journal:  J Synchrotron Radiat       Date:  2017-01-01       Impact factor: 2.616

3.  Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability.

Authors:  Alexander Gorel; Koji Motomura; Hironobu Fukuzawa; R Bruce Doak; Marie Luise Grünbein; Mario Hilpert; Ichiro Inoue; Marco Kloos; Gabriela Kovácsová; Eriko Nango; Karol Nass; Christopher M Roome; Robert L Shoeman; Rie Tanaka; Kensuke Tono; Yasumasa Joti; Makina Yabashi; So Iwata; Lutz Foucar; Kiyoshi Ueda; Thomas R M Barends; Ilme Schlichting
Journal:  Nat Commun       Date:  2017-10-27       Impact factor: 14.919

  3 in total

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