| Literature DB >> 17210755 |
Isabel C Greenman1, Edith Gomez, Claire E J Moore, Terence P Herbert.
Abstract
In pancreatic beta-cells, following an acute (within 1 h) increase in glucose concentration, there are rapid changes in the expression of a large subset of proteins. The change in the expression of many of these proteins is mediated by a post-transcriptional mechanism through either increases or decreases in the rate of translation from pre-existing transcripts. These proteins, whose synthesis is rapidly up- or down-regulated in response to glucose, are likely important in mounting the correct response to changes in plasma glucose concentrations. However, the vast majority of these proteins remain unidentified. Therefore, in order to identify these proteins, we analysed changes in the levels of mRNAs associated with polysomes (i.e. actively translating mRNAs) isolated from mouse insulinoma 6 cells incubated at either 0.5 or 20 mM glucose for 1 h. Changes in the levels of polysomal mRNAs in response to glucose were analysed using affymetrix oligonucleotide microarrays (translational profiling). This work revealed that, in response to a change in glucose concentration, the abundance of 313 transcripts associated with polysomes changed by more than 1.5-fold, of which the abundance of 37 changed by more than twofold. The majority of these transcripts encoded proteins associated with metabolism or gene expression. More detailed analysis showed that a number of mRNAs encoding proteins associated with the induction of oxidative stress, including thioredoxin-2 and thioredoxin-interacting protein were rapidly redistributed onto heavier polysomes at high glucose concentration, indicating an increase in their expression. At low glucose concentration, when the general rate of protein synthesis is low, a number of mRNAs encoding integrated stress response proteins, including ATF4 and CHOP10, associate with heavier polysomes, indicating that their expression is up-regulated. In conclusion, translational profiling has revealed that, at either low or at high glucose concentration, beta-cells rapidly increase the synthesis of a specific subset of proteins that are likely important in maintaining beta-cell integrity and survival during conditions of nutritional stress.Entities:
Mesh:
Substances:
Year: 2007 PMID: 17210755 PMCID: PMC1831533 DOI: 10.1677/joe.1.06898
Source DB: PubMed Journal: J Endocrinol ISSN: 0022-0795 Impact factor: 4.286
Figure 1Glucose stimulated insulin secretion in MIN6 cells. MIN6 cells were pre-incubated in KRB containing 0·5 mM glucose for 1 h followed by incubation in KRB containing 0·5 or 20 mM glucose for a further hour. The amount of insulin secreted into the supernatants was determined by ELISA.
List of polysomal mRNAs whose levels changed by more than twofold in response to an increase in glucose concentration in two independent experiments
| Cell signalling | ||
| Plexizn A2 | −2·00 | |
| Suppressor of cytokine signalling 7 | −2·38 | |
| Potassium inwardly-rectifying channel | −2·47 | |
| RTP801 | −2·56 | |
| β-Spectrin 2, non-erythrocytic | −2·64 | |
| Tribbles homolog 3 | −2·75 | |
| Protein synthesis | ||
| Gene rich cluster, | 2·32 | |
| Metabolism | ||
| Thioredoxin 2 (Trx2) | 8·31 | |
| Thioredoxin interacting protein (TrxIP) | 3·78 | |
| Glutathione peroxidase 4 (GPx4) | 2·62 | |
| Clone IMAGE:6398163 mRNA (homology to NADH dehygrogenase) | 2·14 | |
| S-Adenosylmethionine decarboxylase1 | 2·15 | |
| O-Fucoly transferase | 2·30 | |
| Mitochondrial carrier homolog 1 | 2·00 | |
| Aminolevulinicacid synthase 1 | −2·07 | |
| Transcription | ||
| Early growth response 1 (egr1) | 2·75 | |
| FBJ osteosarcoma oncogene (Fos) | 2·23 | |
| Amino-terminal enhancer of split | 2·15 | |
| Breakpoint cluster region protein 1 | 2·07 | |
| Core promoter element binding protein | −2·15 | |
| RIKEN cDNA2610029D06 gene (zinc finger protein) | −2·23 | |
| Inhibitor of DNA binding 3 | −2·23 | |
| Zinc finger protein 93 | −2·38 | |
| Zinc finger protein 54 | −2·49 | |
| Zinc finger protein | −2·59 | |
| Zinc finger protein 51 | −2·70 | |
| Deltex 2 homolog ( | −2·07 | |
| Activating transcription factor 4 (ATF4) | −3·19 | |
| DNA-damage inducible transcript 3 (CHOP10) | −3·74 | |
| Feminization 1 homolog b ( | −3·98 | |
| Jun-oncogene (c-jun) | −4·33 | |
| Secretion | ||
| Rab acceptor 1 | 2·39 | |
| Rab1B | 2·30 | |
| Calpactin | 2·07 | |
| Unclassified/miscellaneous | ||
| Clone IMAGE:5358852, mRNA | 2·15 | |
| RIKEN cDNA2700019D07 gene | −2·07 | |
| Myosin light chain, alkali, non-muscle | 2·07 |
Average fold change from two independent experiments as calculated by MicroArray Suite 5.
Figure 2Functional classification of polysomal mRNAs, whose levels changed by more than 2-fold or more than 1·5-fold in response to an increase in glucose concentration. Polysomal mRNAs whose levels changed by more than 1·5-fold (a) or more than twofold (b) were functionally classified using NCBI databases (www.ncbi.nlm.nih.gov) according to known cellular functions or sequence similarity to genes of known functions. The proportional representation of each classification group was plotted on a pie chart.
List of polysomal mRNAs associated with oxidative stress or the integrated stress response, whose levels changed by more than 1·5-fold in response to an increase in glucose concentration
| Oxidative stress | ||
| Thioredoxin 2 (Trx2) | 8·31 | |
| Thioredoxin interacting protein (TrxIP) | 3·78 | |
| Glutathione peroxidase 4 (GPx4) | 2·62 | |
| Peroxiredoxin 2 | 1·62 | |
| Integrated stress response | ||
| c-Jun | −4·33 | |
| CHOP10 (GADD153) | −3·74 | |
| Activating transcription factor 4 (ATF4) | −3·19 | |
| Tribbles homolog 3 (Trb3) | −2·75 |
Average fold change from two independent experiments as calculated by MicroArray Suite 5.
Figure 3Polysome analysis of mRNAs associated with oxidative stress. MIN6 cells were pre-incubated in KRB containing 0·5 mM glucose for 1 h followed by incubation in KRB containing 0·5 or 20 mM glucose for a further hour. (a) Cells were lysed and polysome analysis was carried out using 20–50% sucrose gradients. The gradients were fractionated from top (fraction 1) to bottom (fraction 20). (a. i) Absorbance of the gradients was measured continuously at 254 nm to give polysome profiles. (a. ii) RNA was isolated from each fraction and run on 1% agarose formaldehyde gel. RNA was transferred onto nylon membrane and probed for the mRNAs indicated. The results presented are representative of three separate experiments. (b) Cells were lysed and total RNA isolated. The RNA was then run on 1% agarose formaldehyde gel, transferred onto nylon membrane and probed for specific mRNAs as shown. The fold changes observed in the northern blot between low and high glucose concentrations were quantified with ImageJ. The results presented in this figure are representative of three separate experiments.
Figure 4Glucose regulated protein expression. MIN6 cells were incubated in KRB at either 0·5 or 20 mM glucose for the times indicated. Samples of cell lysates were run on a SDS-polyacrylamide gel followed by western blotting using antisera against ATF4, c-Jun, TrxIP and GPx4.