Literature DB >> 17209062

Characterization of ISXax1, a novel insertion sequence restricted to Xanthomonas axonopodis pv. phaseoli (variants fuscans and non-fuscans) and Xanthomonas axonopodis pv. vesicatoria.

Seyed Mehdi Alavi1, Stéphane Poussier, Charles Manceau.   

Abstract

ISXax1 is a novel insertion sequence belonging to the IS256 and Mutator families. Dot blot, Southern blot, and PCR analyses revealed that ISXax1 is restricted to Xanthomonas axonopodis pv. phaseoli (variants fuscans and non-fuscans) and X. axonopodis pv. vesicatoria strains. Directed AFLP also showed that a high degree of polymorphism is associated with ISXax1 insertion in these strains.

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Year:  2007        PMID： 17209062      PMCID： PMC1828756          DOI： 10.1128/AEM.02031-06

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  22 in total

1.  Determining the genomic locations of repetitive DNA sequences with a whole-genome microarray: IS6110 in Mycobacterium tuberculosis.

Authors:  Mårten Kivi; Xuemin Liu; Soumya Raychaudhuri; Russ B Altman; Peter M Small
Journal:  J Clin Microbiol       Date:  2002-06       Impact factor: 5.948

2.  Host plant-dependent phenotypic reversion of Ralstonia solanacearum from non-pathogenic to pathogenic forms via alterations in the phcA gene.

Authors:  Stéphane Poussier; Philippe Thoquet; Danièle Trigalet-Demery; Séverine Barthet; Damien Meyer; Matthieu Arlat; André Trigalet
Journal:  Mol Microbiol       Date:  2003-08       Impact factor: 3.501

3.  Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition.

Authors:  Vinita Joardar; Magdalen Lindeberg; Robert W Jackson; Jeremy Selengut; Robert Dodson; Lauren M Brinkac; Sean C Daugherty; Robert Deboy; A Scott Durkin; Michelle Gwinn Giglio; Ramana Madupu; William C Nelson; M J Rosovitz; Steven Sullivan; Jonathan Crabtree; Todd Creasy; Tanja Davidsen; Dan H Haft; Nikhat Zafar; Liwei Zhou; Rebecca Halpin; Tara Holley; Hoda Khouri; Tamara Feldblyum; Owen White; Claire M Fraser; Arun K Chatterjee; Sam Cartinhour; David J Schneider; John Mansfield; Alan Collmer; C Robin Buell
Journal:  J Bacteriol       Date:  2005-09       Impact factor: 3.490

4.  The evolutionary origin of Xanthomonadales genomes and the nature of the horizontal gene transfer process.

Authors:  Iñaki Comas; Andrés Moya; Rajeev K Azad; Jeffrey G Lawrence; Fernando Gonzalez-Candelas
Journal:  Mol Biol Evol       Date:  2006-08-01       Impact factor: 16.240

Review 5.  Insertion sequences in prokaryotic genomes.

Authors:  Patricia Siguier; Jonathan Filée; Michael Chandler
Journal:  Curr Opin Microbiol       Date:  2006-08-28       Impact factor: 7.934

Review 6.  Insertion sequences.

Authors:  J Mahillon; M Chandler
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

7.  Genetic applications of an inverse polymerase chain reaction.

Authors:  H Ochman; A S Gerber; D L Hartl
Journal:  Genetics       Date:  1988-11       Impact factor: 4.562

8.  A novel mechanism of phase variation of virulence in Staphylococcus epidermidis: evidence for control of the polysaccharide intercellular adhesin synthesis by alternating insertion and excision of the insertion sequence element IS256.

Authors:  W Ziebuhr; V Krimmer; S Rachid; I Lössner; F Götz; J Hacker
Journal:  Mol Microbiol       Date:  1999-04       Impact factor: 3.501

9.  Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence.

Authors:  Frank Thieme; Ralf Koebnik; Thomas Bekel; Carolin Berger; Jens Boch; Daniela Büttner; Camila Caldana; Lars Gaigalat; Alexander Goesmann; Sabine Kay; Oliver Kirchner; Christa Lanz; Burkhard Linke; Alice C McHardy; Folker Meyer; Gerhard Mittenhuber; Dietrich H Nies; Ulla Niesbach-Klösgen; Thomas Patschkowski; Christian Rückert; Oliver Rupp; Susanne Schneiker; Stephan C Schuster; Frank-Jörg Vorhölter; Ernst Weber; Alfred Pühler; Ulla Bonas; Daniela Bartels; Olaf Kaiser
Journal:  J Bacteriol       Date:  2005-11       Impact factor: 3.490

10.  Evolutionary origins of genomic repertoires in bacteria.

Authors:  Emmanuelle Lerat; Vincent Daubin; Howard Ochman; Nancy A Moran
Journal:  PLoS Biol       Date:  2005-04-05       Impact factor: 8.029
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  5 in total

1.  Assessment of the genetic diversity of Xanthomonas axonopodis pv. phaseoli and Xanthomonas fuscans subsp. fuscans as a basis to identify putative pathogenicity genes and a type III secretion system of the SPI-1 family by multiple suppression subtractive hybridizations.

Authors:  Seyed Mehdi Alavi; Saeideh Sanjari; Fabien Durand; Chrystelle Brin; Charles Manceau; Stéphane Poussier
Journal:  Appl Environ Microbiol       Date:  2008-03-21       Impact factor: 4.792

2.  A "repertoire for repertoire" hypothesis: repertoires of type three effectors are candidate determinants of host specificity in Xanthomonas.

Authors:  Ahmed Hajri; Chrystelle Brin; Gilles Hunault; Frédéric Lardeux; Christophe Lemaire; Charles Manceau; Tristan Boureau; Stéphane Poussier
Journal:  PLoS One       Date:  2009-08-14       Impact factor: 3.240

3.  Evolutionary history of the plant pathogenic bacterium Xanthomonas axonopodis.

Authors:  Nadia Mhedbi-Hajri; Ahmed Hajri; Tristan Boureau; Armelle Darrasse; Karine Durand; Chrystelle Brin; Marion Fischer-Le Saux; Charles Manceau; Stéphane Poussier; Olivier Pruvost; Christophe Lemaire; Marie-Agnès Jacques
Journal:  PLoS One       Date:  2013-03-07       Impact factor: 3.240

4.  Aflp analysis of xanthomonas axonopodis and x. Arboricola strains used in xanthan production studies reveal high levels of polymorphism.

Authors:  Laurí Mayer; Wladimir Padilha da Silva; Andrea Bittencourt Moura; Claire Tondo Vendruscolo
Journal:  Braz J Microbiol       Date:  2010-09-01       Impact factor: 2.476

5.  Genome sequence of Xanthomonas fuscans subsp. fuscans strain 4834-R reveals that flagellar motility is not a general feature of xanthomonads.

Authors:  Armelle Darrasse; Sébastien Carrère; Valérie Barbe; Tristan Boureau; Mario L Arrieta-Ortiz; Sophie Bonneau; Martial Briand; Chrystelle Brin; Stéphane Cociancich; Karine Durand; Stéphanie Fouteau; Lionel Gagnevin; Fabien Guérin; Endrick Guy; Arnaud Indiana; Ralf Koebnik; Emmanuelle Lauber; Alejandra Munoz; Laurent D Noël; Isabelle Pieretti; Stéphane Poussier; Olivier Pruvost; Isabelle Robène-Soustrade; Philippe Rott; Monique Royer; Laurana Serres-Giardi; Boris Szurek; Marie-Anne van Sluys; Valérie Verdier; Christian Vernière; Matthieu Arlat; Charles Manceau; Marie-Agnès Jacques
Journal:  BMC Genomics       Date:  2013-11-06       Impact factor: 3.969
  5 in total

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