Literature DB >> 17202286

A proteomic primer for the clinician.

Yurong Guo1, Zongming Fu, Jennifer E Van Eyk.   

Abstract

Proteomics is a rapidly developing field and it opens new horizons in many research areas of life sciences. In the field of medicine, proteomics promises to accelerate the discovery of new drug targets and protein disease markers useful for in vitro diagnosis. In this article, we review the current proteomics technologies for biomarker discovery and validation, which include two-dimensional gel electrophoresis, one- and two-dimensional liquid chromatography, and proteomic microarrays. We will also review proteomic strategies for protein-protein interactions and identification of post-translational modifications. Selection of the more effective technology or combination of technologies is required to maximize the interpretation and utility of the data.

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Year:  2007        PMID: 17202286      PMCID: PMC2647619          DOI: 10.1513/pats.200608-156JG

Source DB:  PubMed          Journal:  Proc Am Thorac Soc        ISSN: 1546-3222


  74 in total

Review 1.  Proteomics: new perspectives, new biomedical opportunities.

Authors:  R E Banks; M J Dunn; D F Hochstrasser; J C Sanchez; W Blackstock; D J Pappin; P J Selby
Journal:  Lancet       Date:  2000-11-18       Impact factor: 79.321

2.  Accurate quantitation of protein expression and site-specific phosphorylation.

Authors:  Y Oda; K Huang; F R Cross; D Cowburn; B T Chait
Journal:  Proc Natl Acad Sci U S A       Date:  1999-06-08       Impact factor: 11.205

3.  Methods for on-chip protein analysis.

Authors:  Emilia Caputo; Ramy Moharram; Brian M Martin
Journal:  Anal Biochem       Date:  2003-10-01       Impact factor: 3.365

4.  National Heart, Lung, And Blood Institute Clinical Proteomics Working Group report.

Authors:  Christopher B Granger; Jennifer E Van Eyk; Stephen C Mockrin; N Leigh Anderson
Journal:  Circulation       Date:  2004-04-13       Impact factor: 29.690

5.  Quantitative proteomic analysis using isobaric protein tags enables rapid comparison of changes in transcript and protein levels in transformed cells.

Authors:  Richard D Unwin; Andrew Pierce; Rod B Watson; David W Sternberg; Anthony D Whetton
Journal:  Mol Cell Proteomics       Date:  2005-04-22       Impact factor: 5.911

6.  Peptide profiling in epithelial tumor plasma by the emerging proteomic techniques.

Authors:  Emilia Caputo; Maria Luisa Lombardi; Vincenza Luongo; Ramy Moharram; Pete Tornatore; Giuseppe Pirozzi; John Guardiola; Brian M Martin
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2005-05-05       Impact factor: 3.205

7.  Investigation of an albumin-enriched fraction of human serum and its albuminome.

Authors:  Rebekah L Gundry; Qin Fu; Christine A Jelinek; Jennifer E Van Eyk; Robert J Cotter
Journal:  Proteomics Clin Appl       Date:  2007-01-01       Impact factor: 3.494

8.  Proteome-scale purification of human proteins from bacteria.

Authors:  Pascal Braun; Yanhui Hu; Binghua Shen; Allison Halleck; Malvika Koundinya; Ed Harlow; Joshua LaBaer
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-05       Impact factor: 11.205

9.  Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides.

Authors:  Kris Gevaert; Marc Goethals; Lennart Martens; Jozef Van Damme; An Staes; Grégoire R Thomas; Joël Vandekerckhove
Journal:  Nat Biotechnol       Date:  2003-03-31       Impact factor: 54.908

10.  Proteomics and bioinformatics approaches for identification of serum biomarkers to detect breast cancer.

Authors:  Jinong Li; Zhen Zhang; Jason Rosenzweig; Young Y Wang; Daniel W Chan
Journal:  Clin Chem       Date:  2002-08       Impact factor: 8.327

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  4 in total

1.  Identification of IMPDH2 as a tumor-associated antigen in colorectal cancer using immunoproteomics analysis.

Authors:  Yujun He; Zhirong Mou; Wanlin Li; Baohua Liu; Tao Fu; Shong Zhao; Debing Xiang; Yuzhang Wu
Journal:  Int J Colorectal Dis       Date:  2009-07-14       Impact factor: 2.571

2.  Proteomics and mass spectrometry: what have we learned about the heart?

Authors:  Shaan Chugh; Colin Suen; Anthony Gramolini
Journal:  Curr Cardiol Rev       Date:  2010-05

3.  Molecular targets for anti-oxidative protection of green tea polyphenols against myocardial ischemic injury.

Authors:  Shih-Rong Hsieh; Wei-Chen Cheng; Yi-Min Su; Chun-Hwei Chiu; Ying-Ming Liou
Journal:  Biomedicine (Taipei)       Date:  2014-11-20

Review 4.  Different Stationary Phase Selectivities and Morphologies for Intact Protein Separations.

Authors:  A Astefanei; I Dapic; M Camenzuli
Journal:  Chromatographia       Date:  2016-09-23       Impact factor: 2.044

  4 in total

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