Literature DB >> 1720004

Simultaneous and rapid isolation of bacterial and eukaryotic DNA and RNA: a new approach for isolating DNA.

D Majumdar1, Y J Avissar, J H Wyche.   

Abstract

A very simple procedure for the simultaneous preparation of genomic DNA and total RNA is described. The procedure is essentially the same for eukaryotes and prokaryotes except for the lysis buffer and can be used for small or large numbers of cells. Mammalian cells are lysed in sodium dodecyl sulfate and bacterial cells are lysed in Triton X-100, both in the presence of EDTA. RNA is obtained in the aqueous phase after phenol (acidic pH):chloroform:isoamyl alcohol extraction. DNA is eluted out of the organic phase (and the interface) into the aqueous phase by increasing the pH with highly basic 1 M Tris solution. The method is extremely rapid for small or large numbers of cells, and several large samples can be processed in one day. The qualities of both nucleic acids are excellent and the yield is high.

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Year:  1991        PMID: 1720004

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  41 in total

1.  Identification of sigma(B)-dependent genes in Bacillus subtilis using a promoter consensus-directed search and oligonucleotide hybridization.

Authors:  A Petersohn; J Bernhardt; U Gerth; D Höper; T Koburger; U Völker; M Hecker
Journal:  J Bacteriol       Date:  1999-09       Impact factor: 3.490

2.  Global analysis of the general stress response of Bacillus subtilis.

Authors:  A Petersohn; M Brigulla; S Haas; J D Hoheisel; U Völker; M Hecker
Journal:  J Bacteriol       Date:  2001-10       Impact factor: 3.490

3.  Binding of sigma(A) and sigma(B) to core RNA polymerase after environmental stress in Bacillus subtilis.

Authors:  Claudia Rollenhagen; Haike Antelmann; Janine Kirstein; Olivier Delumeau; Michael Hecker; Michael D Yudkin
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

4.  Characterization of the sigma(B) regulon in Staphylococcus aureus.

Authors:  S Gertz; S Engelmann; R Schmid; A K Ziebandt; K Tischer; C Scharf; J Hacker; M Hecker
Journal:  J Bacteriol       Date:  2000-12       Impact factor: 3.490

5.  Transcriptional regulation of the phoPR operon in Bacillus subtilis.

Authors:  Zoltán Prágai; Nicholas E E Allenby; Nicola O'Connor; Sarah Dubrac; Georges Rapoport; Tarek Msadek; Colin R Harwood
Journal:  J Bacteriol       Date:  2004-02       Impact factor: 3.490

6.  The YvrI alternative sigma factor is essential for acid stress induction of oxalate decarboxylase in Bacillus subtilis.

Authors:  Shawn R MacLellan; John D Helmann; Haike Antelmann
Journal:  J Bacteriol       Date:  2008-12-01       Impact factor: 3.490

7.  Temperature-sensitive mutants ofStaphylococcus aureus: Isolation and preliminary characterization.

Authors:  D O Sordelli; M F Iglesias; M C Cerquetti; M Catalano; A M Hooke
Journal:  Curr Microbiol       Date:  1993-09       Impact factor: 2.188

8.  Bacillus subtilis tolerance of moderate concentrations of rifampin involves the sigma(B)-dependent general and multiple stress response.

Authors:  Julia Elisabeth Bandow; Heike Brötz; Michael Hecker
Journal:  J Bacteriol       Date:  2002-01       Impact factor: 3.490

9.  Genome-wide transcriptional analysis of the phosphate starvation stimulon of Bacillus subtilis.

Authors:  Nicholas E E Allenby; Nicola O'Connor; Zoltán Prágai; Alan C Ward; Anil Wipat; Colin R Harwood
Journal:  J Bacteriol       Date:  2005-12       Impact factor: 3.490

10.  New architectures for Tet-on and Tet-off regulation in Staphylococcus aureus.

Authors:  Elena Stary; Rosmarie Gaupp; Sabrina Lechner; Martina Leibig; Evelyn Tichy; Martina Kolb; Ralph Bertram
Journal:  Appl Environ Microbiol       Date:  2009-12-04       Impact factor: 4.792

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