Literature DB >> 17199620

The utility of whole genome amplification for typing compromised forensic samples.

Amy L Barber1, David R Foran.   

Abstract

Biological evidence has become invaluable in the crime laboratory; however, it may exist in limited quantity and/or quality. Given this, the ability to amplify total DNA obtained from evidence, in an unbiased manner, would be highly advantageous. Methods for whole genome amplification (WGA) have the potential to fulfill this role, resulting in a virtually unlimited supply of DNA. In the research presented, two WGA methods, improved primer extension preamplification and multiple displacement amplification (MDA), were tested using commercial kits. Control DNA, artificially degraded DNA, and DNA from fresh blood, aged blood, hair shafts, and aged bones underwent WGA, followed by short tandem repeat and mitochondrial DNA analysis. The methods did amplify DNA, but performed poorly on forensically relevant samples; the maximum amplicon size was reduced, and MDA often resulted in extraneous bands following polymerase chain reaction. Taken together, WGA appears to be of limited forensic utility unless the samples are of a very high quality.

Mesh:

Substances:

Year:  2006        PMID: 17199620     DOI: 10.1111/j.1556-4029.2006.00262.x

Source DB:  PubMed          Journal:  J Forensic Sci        ISSN: 0022-1198            Impact factor:   1.832


  8 in total

1.  Short Tandem Repeat analysis after Whole Genome Amplification of single B-lymphoblastoid cells.

Authors:  Lieselot Deleye; Ann-Sophie Vander Plaetsen; Jana Weymaere; Dieter Deforce; Filip Van Nieuwerburgh
Journal:  Sci Rep       Date:  2018-01-19       Impact factor: 4.379

2.  MitoRS, a method for high throughput, sensitive, and accurate detection of mitochondrial DNA heteroplasmy.

Authors:  Julien Marquis; Gregory Lefebvre; Yiannis A I Kourmpetis; Mohamed Kassam; Frédéric Ronga; Umberto De Marchi; Andreas Wiederkehr; Patrick Descombes
Journal:  BMC Genomics       Date:  2017-04-26       Impact factor: 3.969

Review 3.  New Perspectives for Whole Genome Amplification in Forensic STR Analysis.

Authors:  Richard Jäger
Journal:  Int J Mol Sci       Date:  2022-06-25       Impact factor: 6.208

4.  Methods for applying accurate digital PCR analysis on low copy DNA samples.

Authors:  Alexandra S Whale; Simon Cowen; Carole A Foy; Jim F Huggett
Journal:  PLoS One       Date:  2013-03-05       Impact factor: 3.240

5.  Whole genome amplification of degraded and nondegraded DNA for forensic purposes.

Authors:  Agnieszka Maciejewska; Joanna Jakubowska; Ryszard Pawłowski
Journal:  Int J Legal Med       Date:  2012-09-01       Impact factor: 2.686

6.  Whole genome amplification and real-time PCR in forensic casework.

Authors:  Emiliano Giardina; Ilenia Pietrangeli; Claudia Martone; Stefania Zampatti; Patrizio Marsala; Luciano Gabriele; Omero Ricci; Gianluca Solla; Paola Asili; Giovanni Arcudi; Aldo Spinella; Giuseppe Novelli
Journal:  BMC Genomics       Date:  2009-04-14       Impact factor: 3.969

7.  Multiple strand displacement amplification of mitochondrial DNA from clinical samples.

Authors:  Samantha Maragh; John P Jakupciak; Paul D Wagner; William N Rom; David Sidransky; Sudhir Srivastava; Catherine D O'Connell
Journal:  BMC Med Genet       Date:  2008-02-07       Impact factor: 2.103

8.  Fish scales and SNP chips: SNP genotyping and allele frequency estimation in individual and pooled DNA from historical samples of Atlantic salmon (Salmo salar).

Authors:  Susan E Johnston; Meri Lindqvist; Eero Niemelä; Panu Orell; Jaakko Erkinaro; Matthew P Kent; Sigbjørn Lien; Juha-Pekka Vähä; Anti Vasemägi; Craig R Primmer
Journal:  BMC Genomics       Date:  2013-07-03       Impact factor: 3.969

  8 in total

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