Literature DB >> 17199124

Defining an epigenetic code.

Bryan M Turner1.   

Abstract

The nucleosome surface is decorated with an array of enzyme-catalysed modifications on histone tails. These modifications have well-defined roles in a variety of ongoing chromatin functions, often by acting as receptors for non-histone proteins, but their longer-term effects are less clear. Here, an attempt is made to define how histone modifications operate as part of a predictive and heritable epigenetic code that specifies patterns of gene expression through differentiation and development.

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Year:  2007        PMID: 17199124     DOI: 10.1038/ncb0107-2

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.824


  127 in total

1.  Operating on chromatin, a colorful language where context matters.

Authors:  Kathryn E Gardner; C David Allis; Brian D Strahl
Journal:  J Mol Biol       Date:  2011-01-25       Impact factor: 5.469

Review 2.  Dynamic epigenetic regulation in neurons: enzymes, stimuli and signaling pathways.

Authors:  Antonella Riccio
Journal:  Nat Neurosci       Date:  2010-11       Impact factor: 24.884

Review 3.  Regulation of cellular chromatin state: insights from quiescence and differentiation.

Authors:  Surabhi Srivastava; Rakesh K Mishra; Jyotsna Dhawan
Journal:  Organogenesis       Date:  2010 Jan-Mar       Impact factor: 2.500

4.  Protein arginine methyltransferase Prmt5-Mep50 methylates histones H2A and H4 and the histone chaperone nucleoplasmin in Xenopus laevis eggs.

Authors:  Carola Wilczek; Raghu Chitta; Eileen Woo; Jeffrey Shabanowitz; Brian T Chait; Donald F Hunt; David Shechter
Journal:  J Biol Chem       Date:  2011-10-18       Impact factor: 5.157

5.  Locus- and cell type-specific epigenetic switching during cellular differentiation in mammals.

Authors:  Ying-Tao Zhao; Maria Fasolino; Zhaolan Zhou
Journal:  Front Biol (Beijing)       Date:  2016-07-18

Review 6.  Child health, developmental plasticity, and epigenetic programming.

Authors:  Z Hochberg; R Feil; M Constancia; M Fraga; C Junien; J-C Carel; P Boileau; Y Le Bouc; C L Deal; K Lillycrop; R Scharfmann; A Sheppard; M Skinner; M Szyf; R A Waterland; D J Waxman; E Whitelaw; K Ong; K Albertsson-Wikland
Journal:  Endocr Rev       Date:  2010-10-22       Impact factor: 19.871

7.  Genome-wide analysis of histone marks identifying an epigenetic signature of promoters and enhancers underlying cardiac hypertrophy.

Authors:  Roberto Papait; Paola Cattaneo; Paolo Kunderfranco; Carolina Greco; Pierluigi Carullo; Alessandro Guffanti; Valentina Viganò; Giuliano Giuseppe Stirparo; Michael V G Latronico; Gerd Hasenfuss; Ju Chen; Gianluigi Condorelli
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-27       Impact factor: 11.205

8.  Catalytic mechanism of histone acetyltransferase p300: from the proton transfer to acetylation reaction.

Authors:  Xinlei Zhang; Sisheng Ouyang; Xiangqian Kong; Zhongjie Liang; Junyan Lu; Kongkai Zhu; Dan Zhao; Mingyue Zheng; Hualiang Jiang; Xin Liu; Ronen Marmorstein; Cheng Luo
Journal:  J Phys Chem B       Date:  2014-02-19       Impact factor: 2.991

9.  Molecular characterization of class I histone deacetylases and their expression in response to thermal and oxidative stresses in the red flour beetle, Tribolium castaneum.

Authors:  Minxuan Chen; Nan Zhang; Heng Jiang; Xiangkun Meng; Kun Qian; Jianjun Wang
Journal:  Genetica       Date:  2019-05-04       Impact factor: 1.082

Review 10.  1,25-Dihydroxyvitamin D3 induced histone profiles guide discovery of VDR action sites.

Authors:  Mark B Meyer; Nancy A Benkusky; J Wesley Pike
Journal:  J Steroid Biochem Mol Biol       Date:  2013-09-13       Impact factor: 4.292

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