Literature DB >> 17198370

Plasticity of amyloid fibrils.

Ronald Wetzel1, Shankaramma Shivaprasad, Angela D Williams.   

Abstract

In experiments designed to characterize the basis of amyloid fibril stability through mutational analysis of the Abeta (1-40) molecule, fibrils exhibit consistent, significant structural malleability. In these results, and in other properties, amyloid fibrils appear to more resemble plastic materials generated from synthetic polymers than globular proteins. Thus, like synthetic polymers and plastics, amyloid fibrils exhibit both polymorphism, the ability of one polypeptide to form aggregates of different morphologies, and isomorphism, the ability of different polypeptides to grow into a fibrillar amyloid morphology. This view links amyloid with the prehistorical and 20th century use of proteins as starting materials to make films, fibers, and plastics, and with the classic protein fiber stretching experiments of the Astbury group. Viewing amyloids from the point of view of the polymer chemist may shed new light on a number of issues, such as the role of protofibrils in the mechanism of amyloid formation, the biological potency of fibrils, and the prospects for discovering inhibitors of amyloid fibril formation.

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Year:  2007        PMID: 17198370      PMCID: PMC2526019          DOI: 10.1021/bi0620959

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  56 in total

1.  Structural features of the Abeta amyloid fibril elucidated by limited proteolysis.

Authors:  I Kheterpal; A Williams; C Murphy; B Bledsoe; R Wetzel
Journal:  Biochemistry       Date:  2001-10-02       Impact factor: 3.162

2.  The physical basis of how prion conformations determine strain phenotypes.

Authors:  Motomasa Tanaka; Sean R Collins; Brandon H Toyama; Jonathan S Weissman
Journal:  Nature       Date:  2006-06-28       Impact factor: 49.962

3.  Structural differences in Abeta amyloid protofibrils and fibrils mapped by hydrogen exchange--mass spectrometry with on-line proteolytic fragmentation.

Authors:  Indu Kheterpal; Maolian Chen; Kelsey D Cook; Ronald Wetzel
Journal:  J Mol Biol       Date:  2006-07-12       Impact factor: 5.469

4.  Kinetics and thermodynamics of amyloid assembly using a high-performance liquid chromatography-based sedimentation assay.

Authors:  Brian O'Nuallain; Ashwani K Thakur; Angela D Williams; Anusri M Bhattacharyya; Songming Chen; Geetha Thiagarajan; Ronald Wetzel
Journal:  Methods Enzymol       Date:  2006       Impact factor: 1.600

Review 5.  Peptide-based inhibitors of amyloid assembly.

Authors:  Kimberly L Sciarretta; David J Gordon; Stephen C Meredith
Journal:  Methods Enzymol       Date:  2006       Impact factor: 1.600

6.  Characterization of the nanoscale properties of individual amyloid fibrils.

Authors:  Jeffrey F Smith; Tuomas P J Knowles; Christopher M Dobson; Cait E Macphee; Mark E Welland
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-12       Impact factor: 11.205

7.  Pharmacological promotion of inclusion formation: a therapeutic approach for Huntington's and Parkinson's diseases.

Authors:  Ruth A Bodner; Tiago Fleming Outeiro; Stephen Altmann; Michele M Maxwell; Stephanie H Cho; Bradley T Hyman; Pamela J McLean; Anne B Young; David E Housman; Aleksey G Kazantsev
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-06       Impact factor: 11.205

8.  Structural basis for conformational plasticity of the Parkinson's disease-associated ubiquitin hydrolase UCH-L1.

Authors:  Chittaranjan Das; Quyen Q Hoang; Cheryl A Kreinbring; Sarah J Luchansky; Robin K Meray; Soumya S Ray; Peter T Lansbury; Dagmar Ringe; Gregory A Petsko
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-13       Impact factor: 11.205

9.  Analysis of amyloid fibril structure by scanning cysteine mutagenesis.

Authors:  Shankaramma Shivaprasad; Ronald Wetzel
Journal:  Methods Enzymol       Date:  2006       Impact factor: 1.600

Review 10.  A century-old debate on protein aggregation and neurodegeneration enters the clinic.

Authors:  Peter T Lansbury; Hilal A Lashuel
Journal:  Nature       Date:  2006-10-19       Impact factor: 49.962

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  37 in total

1.  Amyloid-beta fibrillogenesis seeded by interface-induced peptide misfolding and self-assembly.

Authors:  Eva Y Chi; Shelli L Frey; Amy Winans; Kin Lok H Lam; Kristian Kjaer; Jaroslaw Majewski; Ka Yee C Lee
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

2.  Detection and analysis of protein aggregation with confocal single molecule fluorescence spectroscopy.

Authors:  Frank Hillger; Daniel Nettels; Simone Dorsch; Benjamin Schuler
Journal:  J Fluoresc       Date:  2007-04-20       Impact factor: 2.217

Review 3.  Protein aggregation processes: In search of the mechanism.

Authors:  Carl Frieden
Journal:  Protein Sci       Date:  2007-11       Impact factor: 6.725

4.  Seeded growth of beta-amyloid fibrils from Alzheimer's brain-derived fibrils produces a distinct fibril structure.

Authors:  Anant K Paravastu; Isam Qahwash; Richard D Leapman; Stephen C Meredith; Robert Tycko
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-17       Impact factor: 11.205

5.  Intrinsic structural heterogeneity and long-term maturation of amyloid β peptide fibrils.

Authors:  Jianqiang Ma; Hiroaki Komatsu; Yung Sam Kim; Liu Liu; Robin M Hochstrasser; Paul H Axelsen
Journal:  ACS Chem Neurosci       Date:  2013-06-12       Impact factor: 4.418

6.  Two-dimensional infrared spectra of isotopically diluted amyloid fibrils from Abeta40.

Authors:  Yung Sam Kim; Liu Liu; Paul H Axelsen; Robin M Hochstrasser
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-22       Impact factor: 11.205

7.  Comparison of Alzheimer Abeta(1-40) and Abeta(1-42) amyloid fibrils reveals similar protofilament structures.

Authors:  Matthias Schmidt; Carsten Sachse; Walter Richter; Chen Xu; Marcus Fändrich; Nikolaus Grigorieff
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-20       Impact factor: 11.205

8.  Kinetically competing huntingtin aggregation pathways control amyloid polymorphism and properties.

Authors:  Murali Jayaraman; Rakesh Mishra; Ravindra Kodali; Ashwani K Thakur; Leonardus M I Koharudin; Angela M Gronenborn; Ronald Wetzel
Journal:  Biochemistry       Date:  2012-03-20       Impact factor: 3.162

9.  Molecular basis for passive immunotherapy of Alzheimer's disease.

Authors:  Anna S Gardberg; Lezlee T Dice; Susan Ou; Rebecca L Rich; Elizabeth Helmbrecht; Jan Ko; Ronald Wetzel; David G Myszka; Paul H Patterson; Chris Dealwis
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-25       Impact factor: 11.205

10.  Nanoscale flexibility parameters of Alzheimer amyloid fibrils determined by electron cryo-microscopy.

Authors:  Carsten Sachse; Nikolaus Grigorieff; Marcus Fändrich
Journal:  Angew Chem Int Ed Engl       Date:  2010-02-08       Impact factor: 15.336

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