Literature DB >> 17195254

High-throughput substrate specificity studies of sialidases by using chemoenzymatically synthesized sialoside libraries.

Harshal A Chokhawala1, Hai Yu, Xi Chen.   

Abstract

Sialidases, or neuraminidases, are enzymes that cleave terminal sialic acid (Sia) residues from complex sialic acid-containing structures. They have been found in many animals and microorganisms and are important in various physiological and pathological processes. In order to understand the biological significance of diverse sialidases, it is important to study in detail the structural determinants of their natural substrates. Here, we report the synthesis of sialoside libraries containing para-nitrophenol-tagged sialosides with different naturally occurring sialic acid forms, different sialyl linkages, and different penultimate monosaccharides using a highly efficient one-pot three-enzyme chemoenzymatic approach. By using these compounds in a 96-well plate-based colorimetric high-throughput screening platform, the diversity of substrate preference is shown for seven bacterial sialidases. The sialoside libraries and the screening method are convenient tools for unravelling the substrate specificity and the biological function of sialidases.

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Year:  2007        PMID: 17195254      PMCID: PMC2610223          DOI: 10.1002/cbic.200600410

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  45 in total

Review 1.  Chemical diversity in the sialic acids and related alpha-keto acids: an evolutionary perspective.

Authors:  Takashi Angata; Ajit Varki
Journal:  Chem Rev       Date:  2002-02       Impact factor: 60.622

Review 2.  Recent advances in the synthesis of sialic acid derivatives and sialylmimetics as biological probes.

Authors:  Milton J Kiefel; Mark von Itzstein
Journal:  Chem Rev       Date:  2002-02       Impact factor: 60.622

3.  The sialic acids. VI. Purification and properties of sialidase from Clostridium perfringens.

Authors:  J T Cassidy; G W Jourdian; S Roseman
Journal:  J Biol Chem       Date:  1965-09       Impact factor: 5.157

4.  Viral and bacterial neuraminidases.

Authors:  R Drzeniek
Journal:  Curr Top Microbiol Immunol       Date:  1972       Impact factor: 4.291

5.  Up-regulation of plasma membrane-associated ganglioside sialidase (Neu3) in human colon cancer and its involvement in apoptosis suppression.

Authors:  Yoichiro Kakugawa; Tadashi Wada; Kazunori Yamaguchi; Hideaki Yamanami; Kiyoaki Ouchi; Ikuro Sato; Taeko Miyagi
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-29       Impact factor: 11.205

6.  Discovery and characterization of sialic acid O-acetylation in group B Streptococcus.

Authors:  Amanda L Lewis; Victor Nizet; Ajit Varki
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-19       Impact factor: 11.205

Review 7.  Sialidase and malignancy: a minireview.

Authors:  Taeko Miyagi; Tadashi Wada; Kazunori Yamaguchi; Keiko Hata
Journal:  Glycoconj J       Date:  2004       Impact factor: 2.916

Review 8.  Pasteurellosis: Pasteurella multocida and Pasteurella hemolytica.

Authors:  G R Carter
Journal:  Adv Vet Sci       Date:  1967

9.  Evidence of regio-specific glycosylation in human intestinal mucins: presence of an acidic gradient along the intestinal tract.

Authors:  Catherine Robbe; Calliope Capon; Emmanuel Maes; Monique Rousset; Alain Zweibaum; Jean-Pierre Zanetta; Jean-Claude Michalski
Journal:  J Biol Chem       Date:  2003-09-02       Impact factor: 5.157

10.  Molecular cloning and characterization of NEU4, the fourth member of the human sialidase gene family.

Authors:  E Monti; M T Bassi; R Bresciani; S Civini; G L Croci; N Papini; M Riboni; G Zanchetti; A Ballabio; A Preti; G Tettamanti; B Venerando; G Borsani
Journal:  Genomics       Date:  2004-03       Impact factor: 5.736

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  38 in total

1.  Chemoenzymatic synthesis of sialosides containing C7-modified sialic acids and their application in sialidase substrate specificity studies.

Authors:  Zahra Khedri; Yanhong Li; Saddam Muthana; Musleh M Muthana; Ching-Wen Hsiao; Hai Yu; Xi Chen
Journal:  Carbohydr Res       Date:  2014-03-06       Impact factor: 2.104

2.  An infant-associated bacterial commensal utilizes breast milk sialyloligosaccharides.

Authors:  David A Sela; Yanhong Li; Larry Lerno; Shuai Wu; Angela M Marcobal; J Bruce German; Xi Chen; Carlito B Lebrilla; David A Mills
Journal:  J Biol Chem       Date:  2011-02-02       Impact factor: 5.157

Review 3.  Advances in the biology and chemistry of sialic acids.

Authors:  Xi Chen; Ajit Varki
Journal:  ACS Chem Biol       Date:  2010-02-19       Impact factor: 5.100

4.  Chemoenzymatic synthesis of para-nitrophenol (pNP)-tagged α2-8-sialosides and high-throughput substrate specificity studies of α2-8-sialidases.

Authors:  Nova Tasnima; Hai Yu; Yanhong Li; Abhishek Santra; Xi Chen
Journal:  Org Biomol Chem       Date:  2016-12-20       Impact factor: 3.876

5.  Identifying selective inhibitors against the human cytosolic sialidase NEU2 by substrate specificity studies.

Authors:  Yanhong Li; Hongzhi Cao; Hai Yu; Yi Chen; Kam Lau; Jingyao Qu; Vireak Thon; Go Sugiarto; Xi Chen
Journal:  Mol Biosyst       Date:  2011-01-04

6.  Converting Pasteurella multocidaα2-3-sialyltransferase 1 (PmST1) to a regioselective α2-6-sialyltransferase by saturation mutagenesis and regioselective screening.

Authors:  John B McArthur; Hai Yu; Jie Zeng; Xi Chen
Journal:  Org Biomol Chem       Date:  2017-01-30       Impact factor: 3.876

7.  α2-6-Neosialidase: A Sialyltransferase Mutant as a Sialyl Linkage-Specific Sialidase.

Authors:  John B McArthur; Hai Yu; Nova Tasnima; Christie M Lee; Andrew J Fisher; Xi Chen
Journal:  ACS Chem Biol       Date:  2018-03-28       Impact factor: 5.100

8.  Pneumococcal Neuraminidase Substrates Identified through Comparative Proteomics Enabled by Chemoselective Labeling.

Authors:  Janet E McCombs; Jennifer J Kohler
Journal:  Bioconjug Chem       Date:  2016-03-22       Impact factor: 4.774

9.  Trans-sialidase activity of Photobacterium damsela alpha2,6-sialyltransferase and its application in the synthesis of sialosides.

Authors:  Jiansong Cheng; Shengshu Huang; Hai Yu; Yanhong Li; Kam Lau; Xi Chen
Journal:  Glycobiology       Date:  2009-10-30       Impact factor: 4.313

10.  Glycan specificity of neuraminidases determined in microarray format.

Authors:  Janet E McCombs; Jason P Diaz; Kevin J Luebke; Jennifer J Kohler
Journal:  Carbohydr Res       Date:  2016-04-08       Impact factor: 2.104

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