Literature DB >> 17189336

Strategies for functional validation of genes involved in reproductive stages of orchids.

Hsiang-Chia Lu1, Hong-Hwa Chen, Wen-Chieh Tsai, Wen-Huei Chen, Hong-Ji Su, Doris Chi-Ning Chang, Hsin-Hung Yeh.   

Abstract

Plants in the largest family of angiosperms, Orchidaceae, are diverse in both specialized pollination and ecological strategies and provide a rich source for investigating evolutionary relationships and developmental biology. However, studies in orchids have been hindered by several challenges that include low transformation efficiency and long regeneration time. To overcome such obstacles, we selected a symptomless cymbidium mosaic virus (CymMV) isolate for constructing virus-induced gene-silencing vectors. The feasibility of the virus vectors was first assessed with use of an orchid phytoene desaturase gene. The vector was able to induce gene silencing in orchids; however, because of the slow growth of orchids, the commonly used phytoene desaturase gene was not a good visual marker in orchids. We inserted a 150-nucleotide unique region of a B-class MADS-box family gene, PeMADS6, into pCymMV-pro60. The transcription level of PeMADS6 in inoculated Phalaenopsis plants was reduced by up to 73%, but no effect was observed for other MADS-box family genes. In contrast, in Phalaenopsis plants inoculated with CymMV transcripts containing 500 nucleotides of PeMADS6, a conserved region among MADS-box genes, the transcription level of PeMADS6 and the B- and C-class MADS-box genes was reduced by up to 97.8% as compared with plants inoculated with the vector alone. Flower morphology was affected in the MADS-box family gene-silenced plants as well. This in vivo experiment demonstrates an efficient way to study genes involved in the reproductive stage of plants with a long life cycle.

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Year:  2006        PMID: 17189336      PMCID: PMC1803755          DOI: 10.1104/pp.106.092742

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  38 in total

1.  Efficient virus-induced gene silencing in Arabidopsis.

Authors:  Tessa M Burch-Smith; Michael Schiff; Yule Liu; S P Dinesh-Kumar
Journal:  Plant Physiol       Date:  2006-06-30       Impact factor: 8.340

2.  Barley stripe mosaic virus-induced gene silencing in a monocot plant.

Authors:  Steve Holzberg; Paul Brosio; Cynthia Gross; Gregory P Pogue
Journal:  Plant J       Date:  2002-05       Impact factor: 6.417

3.  Asynchronous accumulation of lettuce infectious yellows virus RNAs 1 and 2 and identification of an RNA 1 trans enhancer of RNA 2 accumulation.

Authors:  H H Yeh; T Tian; L Rubio; B Crawford; B W Falk
Journal:  J Virol       Date:  2000-07       Impact factor: 5.103

4.  A heterogeneous population of defective RNAs is associated with lettuce infectious yellows virus.

Authors:  L Rubio; H H Yeh; T Tian; B W Falk
Journal:  Virology       Date:  2000-05-25       Impact factor: 3.616

5.  Identification of a MADS-box gene, FLOWERING LOCUS M, that represses flowering.

Authors:  K C Scortecci; S D Michaels; R M Amasino
Journal:  Plant J       Date:  2001-04       Impact factor: 6.417

6.  Development of Bean pod mottle virus-based vectors for stable protein expression and sequence-specific virus-induced gene silencing in soybean.

Authors:  Chunquan Zhang; Said A Ghabrial
Journal:  Virology       Date:  2005-10-14       Impact factor: 3.616

7.  Heterologous sequences greatly affect foreign gene expression in tobacco mosaic virus-based vectors.

Authors:  S Shivprasad; G P Pogue; D J Lewandowski; J Hidalgo; J Donson; L K Grill; W O Dawson
Journal:  Virology       Date:  1999-03-15       Impact factor: 3.616

8.  Virus-induced gene silencing in Solanum species.

Authors:  Gianinna Brigneti; Ana M Martín-Hernández; Hailing Jin; Judy Chen; David C Baulcombe; Barbara Baker; Jonathan D G Jones
Journal:  Plant J       Date:  2004-07       Impact factor: 6.417

9.  Functional analysis of the Antirrhinum floral homeotic DEFICIENS gene in vivo and in vitro by using a temperature-sensitive mutant.

Authors:  S Zachgo; E de A Silva; P Motte; W Tröbner; H Saedler; Z Schwarz-Sommer
Journal:  Development       Date:  1995-09       Impact factor: 6.868

10.  Functional genomics thickens the biological plot.

Authors:  Virginia Gewin
Journal:  PLoS Biol       Date:  2005-06-14       Impact factor: 8.029

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  29 in total

1.  Downregulation of putative UDP-glucose: flavonoid 3-O-glucosyltransferase gene alters flower coloring in Phalaenopsis.

Authors:  Wen-Huei Chen; Chi-Yin Hsu; Hao-Yun Cheng; Hsiang Chang; Hong-Hwa Chen; Mang-Jye Ger
Journal:  Plant Cell Rep       Date:  2011-01-28       Impact factor: 4.570

2.  Virus-induced gene silencing (VIGS) in Cysticapnos vesicaria, a zygomorphic-flowered Papaveraceae (Ranunculales, basal eudicots).

Authors:  Oriane Hidalgo; Conny Bartholmes; Stefan Gleissberg
Journal:  Ann Bot       Date:  2012-02-02       Impact factor: 4.357

3.  Resources for virus-induced gene silencing in the grasses.

Authors:  Steven R Scofield; Richard S Nelson
Journal:  Plant Physiol       Date:  2009-01       Impact factor: 8.340

4.  Three R2R3-MYB transcription factors regulate distinct floral pigmentation patterning in Phalaenopsis spp.

Authors:  Chia-Chi Hsu; You-Yi Chen; Wen-Chieh Tsai; Wen-Huei Chen; Hong-Hwa Chen
Journal:  Plant Physiol       Date:  2015-03-04       Impact factor: 8.340

Review 5.  Current progress in orchid flowering/flower development research.

Authors:  Hsin-Mei Wang; Chii-Gong Tong; Seonghoe Jang
Journal:  Plant Signal Behav       Date:  2017-04-27

6.  Characterization of the possible roles for B class MADS box genes in regulation of perianth formation in orchid.

Authors:  Yu-Yun Chang; Nai-Hsuan Kao; Jen-Ying Li; Wei-Han Hsu; Yu-Ling Liang; Jia-Wei Wu; Chang-Hsien Yang
Journal:  Plant Physiol       Date:  2009-12-16       Impact factor: 8.340

7.  A Foxtail mosaic virus Vector for Virus-Induced Gene Silencing in Maize.

Authors:  Yu Mei; Chunquan Zhang; Bliss M Kernodle; John H Hill; Steven A Whitham
Journal:  Plant Physiol       Date:  2016-04-28       Impact factor: 8.340

Review 8.  Gene silencing approaches through virus-based vectors: speeding up functional genomics in monocots.

Authors:  Ravi Kant; Indranil Dasgupta
Journal:  Plant Mol Biol       Date:  2019-03-08       Impact factor: 4.076

9.  Virus-Induced Gene Silencing in Wheat and Related Monocot Species.

Authors:  Vinay Panwar; Kostya Kanyuka
Journal:  Methods Mol Biol       Date:  2022

10.  An efficient RNA interference screening strategy for gene functional analysis.

Authors:  Chih-Hung Chang; Hsiang-Iu Wang; Hsiang-Chia Lu; Cheng-En Chen; Hong-Hwa Chen; Hsin-Hung Yeh; Chuan Yi Tang
Journal:  BMC Genomics       Date:  2012-09-18       Impact factor: 3.969

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