Literature DB >> 17188837

The role of climate in human mitochondrial DNA evolution: a reappraisal.

Chang Sun1, Qing-Peng Kong, Ya-Ping Zhang.   

Abstract

Previous studies have proposed that selection has been involved in the differentiation of human mitochondrial DNA (mtDNA) and climate was the main driving force. This viewpoint, however, gets no support from the subsequent studies and remains controversial thus far. To clarify this issue, a total of 237 complete mtDNA sequences belonging to autochthonous lineages from South Asia, Oceania, and East Asia were collected to seek for the imprint of selection. Based on nonsynonymous (N) and synonymous (S) substitutions analysis, our results confirmed that purifying selection was the predominant force during the evolution of human mtDNA. However, no significant and extensive difference was detected among these three regions, which did not support the climate adaptation hypothesis but preferred random genetic drift to be the main factor in shaping the current landscape of human mtDNA, at least those from Asian and Oceanian regions.

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Year:  2006        PMID: 17188837     DOI: 10.1016/j.ygeno.2006.11.005

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  15 in total

1.  Mitochondrial genome evidence reveals successful Late Paleolithic settlement on the Tibetan Plateau.

Authors:  Mian Zhao; Qing-Peng Kong; Hua-Wei Wang; Min-Sheng Peng; Xiao-Dong Xie; Wen-Zhi Wang; Jian-Guo Duan; Ming-Cui Cai; Shi-Neng Zhao; Yuan-Quan Tu; Shi-Fang Wu; Yong-Gang Yao; Hans-Jürgen Bandelt; Ya-Ping Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-02       Impact factor: 11.205

2.  Relaxation of selective constraints on avian mitochondrial DNA following the degeneration of flight ability.

Authors:  Yong-Yi Shen; Peng Shi; Yan-Bo Sun; Ya-Ping Zhang
Journal:  Genome Res       Date:  2009-07-17       Impact factor: 9.043

3.  Positive selection on the killer whale mitogenome.

Authors:  Andrew D Foote; Phillip A Morin; John W Durban; Robert L Pitman; Paul Wade; Eske Willerslev; M Thomas P Gilbert; Rute R da Fonseca
Journal:  Biol Lett       Date:  2010-09-01       Impact factor: 3.703

4.  Mitochondrial DNA content contributes to climate adaptation using Chinese populations as a model.

Authors:  Yao-Ting Cheng; Jia Liu; Li-Qin Yang; Chang Sun; Qing-Peng Kong
Journal:  PLoS One       Date:  2013-11-08       Impact factor: 3.240

5.  Evolution of the mitochondrial genome in mammals living at high altitude: new insights from a study of the tribe Caprini (Bovidae, Antilopinae).

Authors:  Alexandre Hassanin; Anne Ropiquet; Arnaud Couloux; Corinne Cruaud
Journal:  J Mol Evol       Date:  2009-03-18       Impact factor: 2.395

6.  Analysis of Canis mitochondrial DNA demonstrates high concordance between the control region and ATPase genes.

Authors:  Linda Y Rutledge; Brent R Patterson; Bradley N White
Journal:  BMC Evol Biol       Date:  2010-07-16       Impact factor: 3.260

7.  Molecular evolution of cytochrome b in high- and low-altitude deer mice (genus Peromyscus).

Authors:  E J Gering; J C Opazo; J F Storz
Journal:  Heredity (Edinb)       Date:  2008-12-24       Impact factor: 3.821

8.  Comparison of mitochondrial mutation spectra in ageing human colonic epithelium and disease: absence of evidence for purifying selection in somatic mitochondrial DNA point mutations.

Authors:  Laura C Greaves; Joanna L Elson; Marco Nooteboom; John P Grady; Geoffrey A Taylor; Robert W Taylor; John C Mathers; Thomas B L Kirkwood; Doug M Turnbull
Journal:  PLoS Genet       Date:  2012-11-15       Impact factor: 5.917

9.  Discrepancy between cranial and DNA data of early Americans: implications for American peopling.

Authors:  S Ivan Perez; Valeria Bernal; Paula N Gonzalez; Marina Sardi; Gustavo G Politis
Journal:  PLoS One       Date:  2009-05-29       Impact factor: 3.240

10.  Climate shaped the worldwide distribution of human mitochondrial DNA sequence variation.

Authors:  François Balloux; Lori-Jayne Lawson Handley; Thibaut Jombart; Hua Liu; Andrea Manica
Journal:  Proc Biol Sci       Date:  2009-07-08       Impact factor: 5.349

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