| Literature DB >> 17187662 |
Kamal Desai1, Marie-Claude Boily, Geoff P Garnett, Benoît R Mâsse, Stephen Moses, Robert C Bailey.
Abstract
BACKGROUND: A landmark randomised trial of male circumcision (MC) in Orange Farm, South Africa recently showed a large and significant reduction in risk of HIV infection, reporting MC effectiveness of 61% (95% CI: 34%-77%). Additionally, two further randomised trials of MC in Kisumu, Kenya and Rakai, Uganda were recently stopped early to report 53% and 48% effectiveness, respectively. Since MC may protect against both HIV and certain sexually transmitted infections (STI), which are themselves cofactors of HIV infection, an important question is the extent to which this estimated effectiveness against HIV is mediated by the protective effect of circumcision against STI. The answer lies in the trial data if the appropriate statistical analyses can be identified to estimate the separate efficacies against HIV and STI, which combine to determine overall effectiveness. OBJECTIVES AND METHODS: Focusing on the MC trial in Kisumu, we used a stochastic prevention trial simulator (1) to determine whether statistical analyses can validly estimate efficacy, (2) to determine whether MC efficacy against STI alone can produce large effectiveness against HIV and (3) to estimate the fraction of all HIV infections prevented that are attributable to efficacy against STI when both efficacies combine.Entities:
Year: 2006 PMID: 17187662 PMCID: PMC1769367 DOI: 10.1186/1742-7622-3-19
Source DB: PubMed Journal: Emerg Themes Epidemiol ISSN: 1742-7622
Model Parameters. Base-case parameter values used in model simulations and base-case outputs for HIV and STI prevalence and incidence are given. Upper and lower limits for parameters varied in sensitivity analyses are also given.
| Rate of progression between 3 stages of HIV infection. Duration of stage 1 is 1/ | [27,34-41] | ||
| Per partnership probability of transmission of HIV from individual of sex k*, sexual activity class j and infection phase p (p = 1,...,3) to partner of opposite sex k and class i. Values given are transmission probabilities for females (k* = 1) of low activity class (j = 1,2 = lowf) or high activity class (j = 3,...,6 = highf) to males of low activity class (i = 1,2 = lowm) or high activity class (i = 3,...,6 = highm). Transmission probabilities for male to female are double of these below. Under sensitivity analyses, values were multiplied by a factor of 0.5, 2.0 or 4.0. | |||
| [27,34,36-28,42-44] | |||
| Recovery rate of STI infection. Duration of infection is 1/ | [45-47] | ||
| Per partnership probability of transmission of STI from infected individual of sex k and sexual activity class j to partner of opposite sex k* and class i. | [45-47] | ||
| A1, a2 | Enhancement of HIV transmission given STI infection. a1 is the relative risk (multiplicative factor) for increased susceptibility to HIV given STI infection in the partner. a2 is the relative risk of increased susceptibility to HIV given STI infection in self. | a1 = 4 | [13] |
| Mortality rate due to AIDS | [39-41] | ||
| mk,i | Annual rate of sexual partner change. mk,i is the number of new sexual partners per year for person of sex k and sexual activity class i. | mk = 1,i = 1...6 = 1.0 3.5 5 10 50 75 | Assumed |
| ppk,i | Percentage of population by activity class i for class k at start of HIV epidemic. | ppk = 1, = 1...6 = 55 20 10 10 2.5 2.5 | Assumed |
| Rate of departure from sexually active population. Lifetime of sexual activity is 1/ | Assumed | ||
| Population | Size of population hosting clinical trial. | 200 000 | Assumed |
| Sample size | Number of individuals recruited to clinical trial (controls + circumcised). | 2 750 with 1:1 randomization | [15,16] |
| Recruitment class | Trial participants are recruited from sex k = 2 and sexual activity classes i = 1,...,3 in same proportions as in ppk,i | ||
| Follow-up | Maximum person-time contributed per individual. | 2 years | [15,16] |
| Incidence- HIV | Average incidence rate of HIV in control group over course of clinical trial. | 2.5%/year (This is a model output) | [15,16] |
| Incidence – STI | Average incidence rate of STI in control group over course of clinical trial. | 22.0%/year (This is a model output) | |
| Prevalence – HIV | Prevalence of HIV in general population. | 18% during course of trial (This is a model output) | [15,16,30] |
| Prevalence – STI | Prevalence of STI in control group | 8.2 %. Under sensitivity analysis, prevalence is 1.8% and 19.0%. (This is a model output) | [15,16,30] |
| Efficacy against HIV due to circumcision. | Assumed | ||
| Efficacy against STI due to circumcision | Assumed | ||
Estimates of efficacy against HIV () and confidence intervals for simulated Kisumu MC trials under different levels of true efficacy against HIV (E) and STI (E) and base-case assumptions. Values for are the median values obtained over 100 repetitions while values in brackets are the median values for upper and lower limits of 95% confidence intervals for E.
| -1.4 (-43.2,27.6) | 9.3 (-28.2,36.9) | 21.0 (-13.5,43.7) | 29.0 (-3.3,51.3) | 37.6 (7.8,58.0) | 49.6 (22.8,66.7) | 58.5 (34.9,73.9) | 69.6 (49.9,81.6) | ||
| -0.6 (-39.6,29.8) | 9.9 (-27.6,35.9) | 20.2 (-16.6,44.2) | 32.2 (1.8,53.5) | 39.1 (9.9,58.6) | 51.6 (25.3,68.3) | 59.8 (37.6,74.5) | 70.7 (52.5,83.2) | ||
| 0.5 (-45.1,29.5) | 10.3 (-23.9,39.9) | 19.9 (-16.1,44.6) | 29.2 (-5.0,51.7) | 37.3 (7.0,57.9) | 48.0 (20.8,66.1) | 59.0 (34.8,74.1) | 68.8 (48.2,81.0) | ||
| -0.8 (-45.4,27.3) | 8.6 (-30.6,36.4) | 17.1 (-19.9,42.7) | 30.9 (-2.2,54.4) | 40.5 (10.1,60.6) | 52.5 (25.0,68.7) | 61.6 (39.6,76.3) | 69.2 (48.0,81.6) | ||
| -0.4 (-46.4,26.8) | 9.7 (-29.3,37.2) | 18.1 (-19.8,44.1) | 29.3 (-7.0,51.7) | 40.5 (9.6,60.9) | 48.4 (19.2,67.2) | 58.7 (33.6,73.9) | 69.5 (48.4,82.1) | ||
Estimates of effectiveness against HIV () and 95% confidence intervals for simulated Kisumu MC trials under different levels of true efficacy against HIV (E) and STI (E) and base-case assumptions. Values for are the median values obtained over 100 repetitions while values in brackets are the median values for upper and lower limits of 95% confidence intervals for F.
| -0.9 (-43.2,27.6) | 8.8 (-28.2,35.8) | 20.4 (-13.7,44.0) | 28.6 (-4.2,51.2) | 37.5 (7.4,58.2) | 49.3 (22.7,66.7) | 58.0 (34.6,73.6) | 69.2 (48.5,81.2) | ||
| 4.2 (-34.7,32.5) | 12.3 (-25.3,38.1) | 22.7 (-13.5,46.7) | 34.8 (4.7,55.2) | 40.6 (12.4,59.7) | 52.8 (28.0,69.4) | 61.0 (40.0,75.2) | 71.7 (52.5,83.2) | ||
| 5.6 (-34.4,34.3) | 15.2 (-17.0,42.9) | 25.4 (-6.7,49.3) | 33.8 (3.3,54.8) | 40.9 (12.5,60.3) | 51.3 (26.0,68.6) | 61.6 (39.3,76.0) | 70.8 (52.2,82.2) | ||
| 7.9 (-32.,35.3) | 17.8 (-17.1,42.3) | 27.1 (-5.1,49.8) | 37.7 (7.2,57.7) | 46.5 (20.1,64.1) | 56.8 (33.2,71.6) | 64.9 (44.9,78.3) | 72.8 (53.5,83.4) | ||
| 13.3 (-24.3,38.0) | 22.4 (-11.6,45.2) | 28.9 (-3.0,50.9) | 38.7 (7.6,58.0) | 49.4 (24.0,66.0) | 56.3 (32.0,72.2) | 64.7 (43.8,77.6) | 73.9 (56.0,84.4) | ||
Expected efficacy estimates against STI () and 95% confidence intervals for simulated Kisumu MC trials under different levels of true efficacy against HIV (E) and STI (E) and base-case assumptions. Values for are the median values obtained over 100 repetitions while values in brackets are the median values for upper and lower limits of 95% confidence intervals for E.
| -0.5 (-19.1,15.2) | -0.8 (-19.7,14.8) | -1.2 (-18.6,15.1) | -0.2 (-18.6,15.1) | -2.0 (-20.4,14.2) | -1.7 (-20.1,13.9) | -2.0 (-20.1,13.9) | -4.7 (-23.8,11.4) | ||
| 18.0 (2.1,31.7) | 17.9 (1.5,31.2) | 18.4 (2.6,31.8) | 16.7 (0.6,30.5) | 17.4 (1.1,30.6) | 16.7 (0.6,30.6) | 16.9 (0.1,30.5) | 18.1 (1.9,31.4) | ||
| 37.5 (24.2,48.5) | 36.8 (23.3,47.9) | 37.0 (23.5,47.9) | 38.0 (24.4,52.0) | 38.0 (24.6,48.9) | 36.3 (22.8,47.6) | 37.9 (24.8,48.9) | 37.5 (42.2,48.4) | ||
| 58.0 (47.9,66.3) | 58.8 (48.8,66.9) | 58.0 (47.8,66.2) | 58.0 (47.6,66.2) | 57.1 (46.7,65.5) | 57.1 (46.7,65.5) | 57.2 (46.7,65.5) | 57.5 (47.0,65.5) | ||
| 78.8 (71.9,84.2) | 79.3 (72.4,84.4) | 78.3 (71.1,83.6) | 79.2 (72.2,84.1) | 78.7 (71.8,84.0) | 78.8 (71.6,84.0) | 78.4 (71.4,83.5) | 78.2 (71.1,83.6) | ||
Figure 1Attributable Fraction and Effectiveness Planes. Left Panel is attributable fraction plane showing regions of low (ligher purple) to high (darker purple) percentage of HIV infections prevented which are attributable in to MC efficacy against STI at different combinations of MC efficacy against HIV (E) and STI (E). Right panel is plane showing regions of low (lighter gold) to high (darker gold) effectiveness at different combinations of MC efficacy against HIV (E) and STI (E).
Figure 2Stochastic compartmental mathematical model of phase III circumcision trial and HIV infection and co-circulating STI in the general population. (t) represents the number of individuals in the general population at time t of sex k and sexual activity class i with HIV infection status h and STI status s. Flows indicate the 28 possible events.
Events and flow rates of individuals between disease states in general population and clinical trials arms.
| 1 | Recruitment into sexually active population | |
| 2 | Departure from sexually active population (DFSA) of STI-/HIV- individuals | |
| 3 | DFSA of STI-/HIV+ infecteds in first disease state | |
| 4 | DFSA of STI-/HIV+HIV infecteds in second disease state | |
| 5 | DFSA of STI-/HIV+HIV infecteds in third disease state | |
| 6 | Departure of AIDS patients who are STI- | |
| 7 | HIV infection of STI-negative susceptibles | |
| 8 | Progression to second state of HIV infection for STI- | |
| 9 | Progression to third state of HIV infection for STI- | |
| 10 | Progression to AIDS for STI- | |
| 11 | Infection with STI for HIV- individuals | |
| 12–14 | Infection with STI for HIV+ individuals | |
| 15–19 | Recovery from STI for HIV+ and HIV- | |
| 20–23 | DFSA for STI+ | |
| 24 | Death rate of AIDS patients who are STI+ | |
| 25 | HIV infection of STI+ positive susceptibles | |
| 26 | Progression to second state of HIV infection for STI+ | |
| 27 | Progression to third state of HIV infection for STI+ | |
| 28 | Progression to AIDS for STI+ | |
| Description of events in control arm of trial | ||
| 29–55 | Defined analogously to general population | |
| Description of event for circumcised individuals | ||
| 56–82 | Defined analogously to general population | |
| 61 | HIV infection of STI-negative susceptibles | R61, |
| 65 | Infection with STI for HIV- individuals | R65, |
| 66 | Infection with STI for HIV+ individuals | R66, |
| 79 | HIV infection of STI+ positive susceptibles | R79, |
Figure 3Additional compartments for clinical trial in stochastic compartmental mathematical model. (t) is the number of individuals in the control arm of the trial and (t) is the number in the treated (circumcised) arm. Circumcision acts to reduce the rate of HIV infection according to (t) = (1 - E)(t) and (t) = (1 - E)(t) and the rate of STI infection according to (t) = (1 - E)(t) and (t) = (1 - E)(t) where Eand Eare the efficacy of circumcision against HIV and STI.