Literature DB >> 17185002

Wavelet-based multi-resolution statistics for optical imaging signals: Application to automated detection of odour activated glomeruli in the mouse olfactory bulb.

Brice Bathellier1, Dimitri Van De Ville, Thierry Blu, Michael Unser, Alan Carleton.   

Abstract

Optical imaging techniques offer powerful solutions to capture brain networks processing in animals, especially when activity is distributed in functionally distinct spatial domains. Despite the progress in imaging techniques, the standard analysis procedures and statistical assessments for this type of data are still limited. In this paper, we perform two in vivo non-invasive optical recording techniques in the mouse olfactory bulb, using a genetically expressed activity reporter fluorescent protein (synaptopHfluorin) and intrinsic signals of the brain. For both imaging techniques, we show that the odour-triggered signals can be accurately parameterized using linear models. Fitting the models allows us to extract odour specific signals with a reduced level of noise compared to standard methods. In addition, the models serve to evaluate statistical significance, using a wavelet-based framework that exploits spatial correlation at different scales. We propose an extension of this framework to extract activation patterns at specific wavelet scales. This method is especially interesting to detect the odour inputs that segregate on the olfactory bulb in small spherical structures called glomeruli. Interestingly, with proper selection of wavelet scales, we can isolate significantly activated glomeruli and thus determine the odour map in an automated manner. Comparison against manual detection of glomeruli shows the high accuracy of the proposed method. Therefore, beyond the advantageous alternative to the existing treatments of optical imaging signals in general, our framework propose an interesting procedure to dissect brain activation patterns on multiple scales with statistical control.

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Year:  2006        PMID: 17185002     DOI: 10.1016/j.neuroimage.2006.10.038

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  19 in total

1.  Internal body state influences topographical plasticity of sensory representations in the rat gustatory cortex.

Authors:  Riccardo Accolla; Alan Carleton
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-27       Impact factor: 11.205

Review 2.  Visualizing odor representation in the brain: a review of imaging techniques for the mapping of sensory activity in the olfactory glomeruli.

Authors:  F Pain; B L'heureux; H Gurden
Journal:  Cell Mol Life Sci       Date:  2011-05-17       Impact factor: 9.261

3.  Multiscale vision model for event detection and reconstruction in two-photon imaging data.

Authors:  Alexey Brazhe; Claus Mathiesen; Barbara Lind; Andrey Rubin; Martin Lauritzen
Journal:  Neurophotonics       Date:  2014-08-27       Impact factor: 3.593

4.  Dynamic linear model analysis of optical imaging data acquired from the human neocortex.

Authors:  Michael Lavine; Michael M Haglund; Daryl W Hochman
Journal:  J Neurosci Methods       Date:  2011-05-27       Impact factor: 2.390

Review 5.  Coding in the mammalian gustatory system.

Authors:  Alan Carleton; Riccardo Accolla; Sidney A Simon
Journal:  Trends Neurosci       Date:  2010-05-20       Impact factor: 13.837

6.  Rapid odor perception in rat olfactory bulb by microelectrode array.

Authors:  Jun Zhou; Qi Dong; Liu-jing Zhuang; Rong Li; Ping Wang
Journal:  J Zhejiang Univ Sci B       Date:  2012-12       Impact factor: 3.066

7.  Dense representation of natural odorants in the mouse olfactory bulb.

Authors:  Roberto Vincis; Olivier Gschwend; Khaleel Bhaukaurally; Jonathan Beroud; Alan Carleton
Journal:  Nat Neurosci       Date:  2012-03-11       Impact factor: 24.884

8.  Odor representations in the olfactory bulb evolve after the first breath and persist as an odor afterimage.

Authors:  Michael Andrew Patterson; Samuel Lagier; Alan Carleton
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-05       Impact factor: 11.205

9.  Similar odor discrimination behavior in head-restrained and freely moving mice.

Authors:  Nixon M Abraham; Delphine Guerin; Khaleel Bhaukaurally; Alan Carleton
Journal:  PLoS One       Date:  2012-12-18       Impact factor: 3.240

10.  Encoding odorant identity by spiking packets of rate-invariant neurons in awake mice.

Authors:  Olivier Gschwend; Jonathan Beroud; Alan Carleton
Journal:  PLoS One       Date:  2012-01-17       Impact factor: 3.240

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