Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 The Star STING server: a multiplatform environment for protein structure analysis.

Literature DB >> 17183482

The Star STING server: a multiplatform environment for protein structure analysis.

G Neshich¹, I Mazoni, S R M Oliveira, M E B Yamagishi, P R Kuser-Falcão, L C Borro, D U Morita, K R R Souza, G V Almeida, D N Rodrigues, J G Jardine, R C Togawa, A L Mancini, R H Higa, S A B Cruz, F D Vieira, E H Santos, R C Melo, M M Santoro.

Abstract

Star STING is the latest version of the STING suite of programs and corresponding database. We report on five important aspects of this package that have acquired some new characteristics, designed to add key advantages to the whole suite: 1) availability for most popular platforms and browsers, 2) introduction of the STING_DB quality assessment, 3) improvement in algorithms for calculation of three STING parameters, 4) introduction of five new STING modules, and 5) expansion of the existing modules. Star STING is freely accessible at: http://sms.cbi.cnptia.embrapa.br/SMS/, http://trantor.bioc.columbia.edu/SMS, http://www.es.embnet.org/SMS/, http://gibk26.bse.kyutech.ac.jp/SMS/ and http://www.ar.embnet.org/SMS.

Entities: Gene

Mesh：

Substances：
Proteins

Year: 2006 PMID： 17183482

Source DB: PubMed Journal: Genet Mol Res ISSN： 1676-5680

Keyword Cloud
Cited

6 in total

1. Analysis of binding properties and specificity through identification of the interface forming residues (IFR) for serine proteases in silico docked to different inhibitors.

Authors: Cristina Ribeiro; Roberto C Togawa; Izabella A P Neshich; Ivan Mazoni; Adauto L Mancini; Raquel C de Melo Minardi; Carlos H da Silveira; José G Jardine; Marcelo M Santoro; Goran Neshich
Journal: BMC Struct Biol Date: 2010-10-20

2. Improving predictions of protein-protein interfaces by combining amino acid-specific classifiers based on structural and physicochemical descriptors with their weighted neighbor averages.

Authors: Fábio R de Moraes; Izabella A P Neshich; Ivan Mazoni; Inácio H Yano; José G C Pereira; José A Salim; José G Jardine; Goran Neshich
Journal: PLoS One Date: 2014-01-28 Impact factor: 3.240

The Star STING server: a multiplatform environment for protein structure analysis.

1. Analysis of binding properties and specificity through identification of the interface forming residues (IFR) for serine proteases in silico docked to different inhibitors.

2. Improving predictions of protein-protein interfaces by combining amino acid-specific classifiers based on structural and physicochemical descriptors with their weighted neighbor averages.

3. Algorithmic approaches to protein-protein interaction site prediction.

4. Flexible mapping of homology onto structure with homolmapper.

5. Computational biology in Brazil.

6. Identification of new sphingomyelinases D in pathogenic fungi and other pathogenic organisms.