Literature DB >> 17179746

RNomenclature.

Jürgen Brosius1, Henri Tiedge.   

Abstract

RNAs that do not encode proteins, increasing evidence shows, are the rule rather than the exception. How do we call these RNAs? The term non-coding RNA should be rejected, we argue, since it constitutes a contradiction in terms: most if not all RNAs carry a code, even though that code may not specify an amino acid sequence. In naming these RNAs, we suggest to follow a natural distinction between two broad classes of RNAs. Class I RNAs are those that are transcribed but not translated, i.e., do not contain a translatable Open Reading Frame (ORF). Class II RNAs are transcribed and subsequently translated into amino acid sequences by the ribosomal translational apparatus. Class II RNAs comprise the familiar mRNAs, including peptide-coding RNAs. Class I RNAs, we suggest, are most fittingly called utRNAs (untranslated RNAs). The term npcRNAs (non-peptide/protein coding) can be used synonymously.

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Substances:

Year:  2004        PMID: 17179746     DOI: 10.4161/rna.1.2.1228

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  18 in total

Review 1.  RNA transport and local control of translation.

Authors:  Stefan Kindler; Huidong Wang; Dietmar Richter; Henri Tiedge
Journal:  Annu Rev Cell Dev Biol       Date:  2005       Impact factor: 13.827

Review 2.  K-turn motifs in spatial RNA coding.

Authors:  Henri Tiedge
Journal:  RNA Biol       Date:  2006-10-31       Impact factor: 4.652

3.  Neuronal BC1 RNA: microtubule-dependent dendritic delivery.

Authors:  Massimiliano Cristofanilli; Anna Iacoangeli; Ilham A Muslimov; Henri Tiedge
Journal:  J Mol Biol       Date:  2005-12-19       Impact factor: 5.469

4.  Application of housekeeping npcRNAs for quantitative expression analysis of human transcriptome by real-time PCR.

Authors:  Chenna R Galiveti; Timofey S Rozhdestvensky; Jürgen Brosius; Hans Lehrach; Zoltán Konthur
Journal:  RNA       Date:  2009-12-29       Impact factor: 4.942

5.  Long non-coding RNA normalisers in human brain tissue.

Authors:  Theo F J Kraus; Andrea Greiner; Virginie Guibourt; Hans A Kretzschmar
Journal:  J Neural Transm (Vienna)       Date:  2014-12-21       Impact factor: 3.575

Review 6.  Genomic imprinting-an epigenetic gene-regulatory model.

Authors:  Martha V Koerner; Denise P Barlow
Journal:  Curr Opin Genet Dev       Date:  2010-02-12       Impact factor: 5.578

Review 7.  Regulatory RNAs in brain function and disorders.

Authors:  Anna Iacoangeli; Riccardo Bianchi; Henri Tiedge
Journal:  Brain Res       Date:  2010-03-20       Impact factor: 3.252

8.  Translational control by a small RNA: dendritic BC1 RNA targets the eukaryotic initiation factor 4A helicase mechanism.

Authors:  Daisy Lin; Tatyana V Pestova; Christopher U T Hellen; Henri Tiedge
Journal:  Mol Cell Biol       Date:  2008-03-03       Impact factor: 4.272

9.  Dendritic BC1 RNA in translational control mechanisms.

Authors:  Huidong Wang; Anna Iacoangeli; Daisy Lin; Keith Williams; Robert B Denman; Christopher U T Hellen; Henri Tiedge
Journal:  J Cell Biol       Date:  2005-12-05       Impact factor: 10.539

10.  The vast, conserved mammalian lincRNome.

Authors:  David Managadze; Alexander E Lobkovsky; Yuri I Wolf; Svetlana A Shabalina; Igor B Rogozin; Eugene V Koonin
Journal:  PLoS Comput Biol       Date:  2013-02-28       Impact factor: 4.475

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