Literature DB >> 17172764

Phase determination using halide ions.

Miroslawa Dauter1, Zbigniew Dauter.   

Abstract

A short soak of protein crystals in cryosolution containing bromides or iodides leads to incorporation of these ions into the ordered solvent shell around the protein surface. The halide ions display significant anomalous signal, bromides in the vicinity of the absorption edge at 0.92 A, and iodides at longer wavelengths, e.g., provided by the copper sources. Bromides can, therefore, be used through multiwavelength anomalous diffraction or single-wavelength anomalous diffraction (SAD) techniques and iodides through SAD or multiple isomorphous replacement (MIRAS) phasing. The halide cryosoaking approach involves very little preparative effort and offers a rapid and simple way of solving novel protein crystal structures.

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Year:  2007        PMID: 17172764     DOI: 10.1385/1-59745-266-1:149

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  16 in total

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Authors:  George T Lountos; Joseph E Tropea; David S Waugh
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-02-07

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Authors:  George T Lountos; Brian P Austin; Sreedevi Nallamsetty; David S Waugh
Journal:  Protein Sci       Date:  2009-02       Impact factor: 6.725

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Authors:  Daniela Mavrici; Mohlopheni J Marakalala; James M Holton; Daniil M Prigozhin; Christine L Gee; Yanjia J Zhang; Eric J Rubin; Tom Alber
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-19       Impact factor: 11.205

4.  Crystallization and preliminary X-ray diffraction analysis of PsaA, the adhesive pilin subunit that forms the pH 6 antigen on the surface of Yersinia pestis.

Authors:  Rui Bao; Lothar Esser; Annapurna Sadhukhan; Manoj K M Nair; Dieter M Schifferli; Di Xia
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-09-29

5.  Purification, crystallization and preliminary X-ray diffraction of a disulfide cross-linked complex between bovine poly(A) polymerase and a chemically modified 15-mer oligo(A) RNA.

Authors:  Qin Yang; Frédérick Faucher; Molly Coseno; Joyce Heckman; Sylvie Doublié
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-01-22

6.  Crystal Structure of the N-Acetylmuramic Acid α-1-Phosphate (MurNAc-α1-P) Uridylyltransferase MurU, a Minimal Sugar Nucleotidyltransferase and Potential Drug Target Enzyme in Gram-negative Pathogens.

Authors:  Michaela Renner-Schneck; Isabel Hinderberger; Jonathan Gisin; Thomas Exner; Christoph Mayer; Thilo Stehle
Journal:  J Biol Chem       Date:  2015-03-12       Impact factor: 5.157

7.  Mycobacterium tuberculosis Rv2704 is a member of the YjgF/YER057c/UK114 family.

Authors:  Krishan Gopal Thakur; T Praveena; B Gopal
Journal:  Proteins       Date:  2010-02-15

Review 8.  The young person's guide to the PDB.

Authors:  Wladek Minor; Zbigniew Dauter; Mariusz Jaskolski
Journal:  Postepy Biochem       Date:  2016

9.  Structure of a Burkholderia pseudomallei trimeric autotransporter adhesin head.

Authors:  Thomas E Edwards; Isabelle Phan; Jan Abendroth; Shellie H Dieterich; Amir Masoudi; Wenjin Guo; Stephen N Hewitt; Angela Kelley; David Leibly; Mitch J Brittnacher; Bart L Staker; Samuel I Miller; Wesley C Van Voorhis; Peter J Myler; Lance J Stewart
Journal:  PLoS One       Date:  2010-09-20       Impact factor: 3.240

10.  SAD phasing using iodide ions in a high-throughput structural genomics environment.

Authors:  Jan Abendroth; Anna S Gardberg; John I Robinson; Jeff S Christensen; Bart L Staker; Peter J Myler; Lance J Stewart; Thomas E Edwards
Journal:  J Struct Funct Genomics       Date:  2011-02-27
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