Literature DB >> 17172675

Analyzing the cardiac muscle proteome by liquid chromatography-mass spectrometry-based expression proteomics.

Anthony O Gramolini1, Thomas Kislinger, Peter Liu, David H MacLennan, Andrew Emili.   

Abstract

Cardiomyopathies are diseases of the heart resulting in impaired cardiac muscle function, which can lead to heart dilation or overt heart failure. These diseases represent a major cause of global morbidity and death. Innovative preventive and therapeutic measures are urgently needed for early detection, categorization, and treatment of patients at risk of cardiomyopathy. These developments will require a more complete understanding of the molecular effects of impaired cardiac function, even prior to overt disease. The use of gel-free expression proteomics in the detailed analysis of cardiac tissues should yield significant insight into the pathophysiology of these diseases.

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Year:  2007        PMID: 17172675      PMCID: PMC3706331          DOI: 10.1385/1-59745-214-9:15

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  25 in total

1.  Proteomic characterization of the human centrosome by protein correlation profiling.

Authors:  Jens S Andersen; Christopher J Wilkinson; Thibault Mayor; Peter Mortensen; Erich A Nigg; Matthias Mann
Journal:  Nature       Date:  2003-12-04       Impact factor: 49.962

2.  Dynamic changes in transcription factor complexes during erythroid differentiation revealed by quantitative proteomics.

Authors:  Marjorie Brand; Jeffrey A Ranish; Nicolas T Kummer; Joan Hamilton; Kazuhiko Igarashi; Claire Francastel; Tian H Chi; Gerald R Crabtree; Ruedi Aebersold; Mark Groudine
Journal:  Nat Struct Mol Biol       Date:  2003-12-29       Impact factor: 15.369

Review 3.  Going global: protein expression profiling using shotgun mass spectrometry.

Authors:  Thomas Kislinger; Andrew Emili
Journal:  Curr Opin Mol Ther       Date:  2003-06

4.  Nuclear membrane proteins with potential disease links found by subtractive proteomics.

Authors:  Eric C Schirmer; Laurence Florens; Tinglu Guan; John R Yates; Larry Gerace
Journal:  Science       Date:  2003-09-05       Impact factor: 47.728

5.  Direct proteomic mapping of the lung microvascular endothelial cell surface in vivo and in cell culture.

Authors:  Eberhard Durr; Jingyi Yu; Karolina M Krasinska; Lucy A Carver; John R Yates; Jacqueline E Testa; Phil Oh; Jan E Schnitzer
Journal:  Nat Biotechnol       Date:  2004-07-18       Impact factor: 54.908

6.  Proteome dynamics during C2C12 myoblast differentiation.

Authors:  Thomas Kislinger; Anthony O Gramolini; Yan Pan; Khaled Rahman; David H MacLennan; Andrew Emili
Journal:  Mol Cell Proteomics       Date:  2005-04-11       Impact factor: 5.911

7.  Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria.

Authors:  Vamsi K Mootha; Jakob Bunkenborg; Jesper V Olsen; Majbrit Hjerrild; Jacek R Wisniewski; Erich Stahl; Marjan S Bolouri; Heta N Ray; Smita Sihag; Michael Kamal; Nick Patterson; Eric S Lander; Matthias Mann
Journal:  Cell       Date:  2003-11-26       Impact factor: 41.582

8.  Cluster analysis and display of genome-wide expression patterns.

Authors:  M B Eisen; P T Spellman; P O Brown; D Botstein
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-08       Impact factor: 11.205

Review 9.  Genomics, proteomics and bioinformatics of human heart failure.

Authors:  C G Dos Remedios; C C Liew; P D Allen; R L Winslow; J E Van Eyk; M J Dunn
Journal:  J Muscle Res Cell Motil       Date:  2003       Impact factor: 2.698

10.  Identification of biochemical adaptations in hyper- or hypocontractile hearts from phospholamban mutant mice by expression proteomics.

Authors:  Yan Pan; Thomas Kislinger; Anthony O Gramolini; Elena Zvaritch; Evangelia G Kranias; David H MacLennan; Andrew Emili
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-24       Impact factor: 11.205

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  4 in total

1.  Systems analysis reveals down-regulation of a network of pro-survival miRNAs drives the apoptotic response in dilated cardiomyopathy.

Authors:  Ruth Isserlin; Daniele Merico; Dingyan Wang; Dajana Vuckovic; Nicolas Bousette; Anthony O Gramolini; Gary D Bader; Andrew Emili
Journal:  Mol Biosyst       Date:  2014-10-31

2.  Constitutively active calcineurin induces cardiac endoplasmic reticulum stress and protects against apoptosis that is mediated by alpha-crystallin-B.

Authors:  Nicolas Bousette; Shaan Chugh; Vincent Fong; Ruth Isserlin; Kyoung-Han Kim; Allen Volchuk; Peter H Backx; Peter Liu; Thomas Kislinger; David H MacLennan; Andrew Emili; Anthony O Gramolini
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-11       Impact factor: 11.205

3.  Pathway analysis of dilated cardiomyopathy using global proteomic profiling and enrichment maps.

Authors:  Ruth Isserlin; Daniele Merico; Rasoul Alikhani-Koupaei; Anthony Gramolini; Gary D Bader; Andrew Emili
Journal:  Proteomics       Date:  2010-03       Impact factor: 3.984

4.  AKAP6 and phospholamban colocalize and interact in HEK-293T cells and primary murine cardiomyocytes.

Authors:  Farigol Hakem Zadeh; Allen C T Teng; Uros Kuzmanov; Paige J Chambers; Allan R Tupling; Anthony O Gramolini
Journal:  Physiol Rep       Date:  2019-07
  4 in total

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