Literature DB >> 17166908

Evolutionary history and global spread of the emerging g12 human rotaviruses.

Mustafizur Rahman1, Jelle Matthijnssens, Xuelei Yang, Thomas Delbeke, Ingrid Arijs, Koki Taniguchi, Miren Iturriza-Gómara, Nadia Iftekharuddin, Tasnim Azim, Marc Van Ranst.   

Abstract

G12 rotaviruses were first detected in diarrheic children in the Philippines in 1987, but no further cases were reported until 1998. However, G12 rotaviruses have been detected all over the world in recent years. Here, we report the worldwide variations of G12 rotaviruses to investigate the evolutionary mechanisms by which they managed to spread globally in a short period of time. We sequenced the complete genomes (11 segments) of nine G12 rotaviruses isolated in Bangladesh, Belgium, Thailand, and the Philippines and compared them with the genomes of other rotavirus strains. Our genetic analyses revealed that after introduction of the VP7 gene of the rare G12 genotype into more common local strains through reassortment, a vast genetic diversity was generated and several new variants with distinct gene constellations emerged. These reassortment events most likely took place in Southeast Asian countries and spread to other parts of the world. The acquirement of gene segments from human-adapted rotaviruses might allow G12 to better propagate in humans and hence to develop into an important emerging human pathogen.

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Year:  2006        PMID: 17166908      PMCID: PMC1865926          DOI: 10.1128/JVI.01622-06

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  40 in total

Review 1.  Genetic and antigenic diversity of human rotaviruses: potential impact on the success of candidate vaccines.

Authors:  E A Palombo
Journal:  FEMS Microbiol Lett       Date:  1999-12-01       Impact factor: 2.742

2.  Reassortment in vivo: driving force for diversity of human rotavirus strains isolated in the United Kingdom between 1995 and 1999.

Authors:  M Iturriza-Gómara; B Isherwood; U Desselberger; J Gray
Journal:  J Virol       Date:  2001-04       Impact factor: 5.103

3.  The expanding diversity of rotaviruses.

Authors:  Nigel A Cunliffe; Joseph S Bresee; Jon R Gentsch; Roger I Glass; C Anthony Hart
Journal:  Lancet       Date:  2002-02-23       Impact factor: 79.321

4.  Characterization of nontypeable rotavirus strains from the United States: identification of a new rotavirus reassortant (P2A[6],G12) and rare P3[9] strains related to bovine rotaviruses.

Authors:  D D Griffin; T Nakagomi; Y Hoshino; O Nakagomi; C D Kirkwood; U D Parashar; R I Glass; J R Gentsch
Journal:  Virology       Date:  2002-03-15       Impact factor: 3.616

5.  Frequent reassortments may explain the genetic heterogeneity of rotaviruses: analysis of Finnish rotavirus strains.

Authors:  Leena Maunula; Carl-Henrik Von Bonsdorff
Journal:  J Virol       Date:  2002-12       Impact factor: 5.103

Review 6.  Genomic relationships among rotaviruses recovered from various animal species as revealed by RNA-RNA hybridization assays.

Authors:  O Nakagomi; T Nakagomi
Journal:  Res Vet Sci       Date:  2002-12       Impact factor: 2.534

7.  Characterization of serotype G9 rotavirus strains isolated in the United States and India from 1993 to 2001.

Authors:  A R Laird; J R Gentsch; T Nakagomi; O Nakagomi; R I Glass
Journal:  J Clin Microbiol       Date:  2003-07       Impact factor: 5.948

8.  Three-dimensional structure of rotavirus.

Authors:  B V Prasad; G J Wang; J P Clerx; W Chiu
Journal:  J Mol Biol       Date:  1988-01-20       Impact factor: 5.469

9.  Detection of a human rotavirus with G12 and P[9] specificity in Thailand.

Authors:  Y Pongsuwanna; R Guntapong; M Chiwakul; R Tacharoenmuang; N Onvimala; M Wakuda; N Kobayashi; K Taniguchi
Journal:  J Clin Microbiol       Date:  2002-04       Impact factor: 5.948

10.  Emergence of novel human group A rotavirus G12 strains in India.

Authors:  Soma Das; V Varghese; S Chaudhury; P Barman; S Mahapatra; K Kojima; S K Bhattacharya; T Krishnan; R K Ratho; G P Chhotray; A C Phukan; N Kobayashi; T N Naik
Journal:  J Clin Microbiol       Date:  2003-06       Impact factor: 5.948

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  86 in total

1.  Complete genomic characterization of cell culture adapted human G12P[6] rotaviruses isolated from South Korea.

Authors:  Van Thai Than; Van Phan Le; Inseok Lim; Wonyong Kim
Journal:  Virus Genes       Date:  2011-01-30       Impact factor: 2.332

2.  Characterization of a novel G3P[3] rotavirus isolated from a lesser horseshoe bat: a distant relative of feline/canine rotaviruses.

Authors:  Biao He; Fanli Yang; Weihong Yang; Yuzhen Zhang; Yun Feng; Jihua Zhou; Jinxin Xie; Ye Feng; Xiaolei Bao; Huancheng Guo; Yingying Li; Lele Xia; Nan Li; Jelle Matthijnssens; Hailin Zhang; Changchun Tu
Journal:  J Virol       Date:  2013-09-11       Impact factor: 5.103

3.  Development of a microtiter plate hybridization-based PCR-enzyme-linked immunosorbent assay for identification of clinically relevant human group A rotavirus G and P genotypes.

Authors:  Norma Santos; Shinjiro Honma; Maria do Carmo S T Timenetsky; Alexandre C Linhares; Hiroshi Ushijima; George E Armah; Jon R Gentsch; Yasutaka Hoshino
Journal:  J Clin Microbiol       Date:  2007-12-05       Impact factor: 5.948

4.  Simian rotaviruses possess divergent gene constellations that originated from interspecies transmission and reassortment.

Authors:  Jelle Matthijnssens; Zenobia F Taraporewala; Hongyan Yang; Shujing Rao; Lijuan Yuan; Dianjun Cao; Yasutaka Hoshino; Peter P C Mertens; Gerry R Carner; Monica McNeal; Karol Sestak; Marc Van Ranst; John T Patton
Journal:  J Virol       Date:  2009-11-25       Impact factor: 5.103

5.  Development and validation of DNA microarray for genotyping group A rotavirus VP4 (P[4], P[6], P[8], P[9], and P[14]) and VP7 (G1 to G6, G8 to G10, and G12) genes.

Authors:  Shinjiro Honma; Vladimir Chizhikov; Norma Santos; Masatoshi Tatsumi; Maria do Carmo S T Timenetsky; Alexandre C Linhares; Joana D'Arc P Mascarenhas; Hiroshi Ushijima; George E Armah; Jon R Gentsch; Yasutaka Hoshino
Journal:  J Clin Microbiol       Date:  2007-06-13       Impact factor: 5.948

6.  Full genomic analysis and possible origin of a porcine G12 rotavirus strain RU172.

Authors:  S Ghosh; N Kobayashi; S Nagashima; M Chawla-Sarkar; T Krishnan; B Ganesh; T N Naik
Journal:  Virus Genes       Date:  2010-02-16       Impact factor: 2.332

7.  Full-genome characterization of a G8P[8] rotavirus that emerged among children with diarrhea in Croatia in 2006.

Authors:  Roberto Delogu; Alessandra Lo Presti; Franco Maria Ruggeri; Eleonora Cella; Marta Giovanetti; Massimo Ciccozzi; Suncanica Ljubin-Sternak; Suzana Bukovski-Simonoski; Amarela Lukic-Grlic; Giovanni Ianiro; Lucia Fiore
Journal:  J Clin Microbiol       Date:  2013-02-20       Impact factor: 5.948

8.  Reverse Genetics Approach for Developing Rotavirus Vaccine Candidates Carrying VP4 and VP7 Genes Cloned from Clinical Isolates of Human Rotavirus.

Authors:  Yuta Kanai; Misa Onishi; Takahiro Kawagishi; Pimfhun Pannacha; Jeffery A Nurdin; Ryotaro Nouda; Moeko Yamasaki; Tina Lusiany; Pattara Khamrin; Shoko Okitsu; Satoshi Hayakawa; Hirotaka Ebina; Hiroshi Ushijima; Takeshi Kobayashi
Journal:  J Virol       Date:  2020-12-22       Impact factor: 5.103

9.  Molecular characterization of rare bovine group A rotavirus G15P[11] and G15P[21] strains from eastern India: identification of simian SA11-like VP6 genes in G15P[21] strains.

Authors:  Souvik Ghosh; Sudipta Samajdar; Manju Sinha; Nobumichi Kobayashi; Koki Taniguchi; Trailokya N Naik
Journal:  Virus Genes       Date:  2008-08-05       Impact factor: 2.332

10.  Serotype g12 rotaviruses, Lilongwe, Malawi.

Authors:  Nigel A Cunliffe; Bagrey M Ngwira; Winifred Dove; Osamu Nakagomi; Toyoko Nakagomi; Arantza Perez; C Anthony Hart; Peter N Kazembe; Charles C V Mwansambo
Journal:  Emerg Infect Dis       Date:  2009-01       Impact factor: 6.883

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