Literature DB >> 17165236

The agarase gene (dagA) of Streptomyces coelicolor A3(2): nucleotide sequence and transcriptional analysis.

M J Buttner1, I M Fearnley, M J Bibb.   

Abstract

The DNA sequence of a 1.77 kb region of the Streptomyces coelicolor chromosome containing the coding and regulatory regions of the extracellular agarase (dagA) gene was determined. The sequence predicts a primary translation product of 309 amino acids and Mr 35132. Comparison of the N-terminal sequence determined for the mature extracellular protein with that of the primary translation product deduced from the DNA sequence predicts the presence of a 30 amino acid signal peptide. Analysis of the transcription of the dagA gene using high resolution S1 mapping, in vitro transcription, dinucleotide-primed in vitro transcription and in vivo promoter probing identified four promoters, initiating transcription approximately 32, 77, 125 and 200 nucleotides upstream of the coding sequence.

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Year:  1987        PMID: 17165236     DOI: 10.1007/bf00329843

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  47 in total

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Journal:  Appl Microbiol       Date:  1975-08

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Review 3.  Cyclic AMP receptor protein: role in transcription activation.

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Journal:  J Mol Biol       Date:  1983-06-25       Impact factor: 5.469

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Authors:  S Adhya; S Garges
Journal:  Cell       Date:  1982-06       Impact factor: 41.582

6.  Construction of improved M13 vectors using oligodeoxynucleotide-directed mutagenesis.

Authors:  J Norrander; T Kempe; J Messing
Journal:  Gene       Date:  1983-12       Impact factor: 3.688

7.  Similar amino acid sequences: chance or common ancestry?

Authors:  R F Doolittle
Journal:  Science       Date:  1981-10-09       Impact factor: 47.728

8.  Catabolite repression in Streptomyces venezuelae. Induction of beta-galactosidase, chloramphenicol production, and intracellular cyclic adenosine 3',5'-monophosphate concentrations.

Authors:  S Chatterjee; L C Vining
Journal:  Can J Microbiol       Date:  1982-03       Impact factor: 2.419

9.  Cloning and expression of an extracellular-agarase from Streptomyces coelicolor A3(2) in Streptomyces lividans 66.

Authors:  K Kendall; J Cullum
Journal:  Gene       Date:  1984-09       Impact factor: 3.688

10.  The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites.

Authors:  J Shine; L Dalgarno
Journal:  Proc Natl Acad Sci U S A       Date:  1974-04       Impact factor: 11.205

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  59 in total

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Journal:  J Bacteriol       Date:  2000-06       Impact factor: 3.490

2.  In vivo translational start site selection on leaderless mRNA transcribed from the Streptomyces fradiae aph gene.

Authors:  R L Jones; J C Jaskula; G R Janssen
Journal:  J Bacteriol       Date:  1992-07       Impact factor: 3.490

Review 3.  Compilation and analysis of DNA sequences associated with apparent streptomycete promoters.

Authors:  W R Strohl
Journal:  Nucleic Acids Res       Date:  1992-03-11       Impact factor: 16.971

4.  Rhodococcus sp. Q5, a novel agarolytic bacterium isolated from printing and dyeing wastewater.

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5.  Cloning, sequencing, and regulation of expression of an extracellular esterase gene from the plant pathogen Streptomyces scabies.

Authors:  G Raymer; J M Willard; J L Schottel
Journal:  J Bacteriol       Date:  1990-12       Impact factor: 3.490

6.  Nucleotide sequence and expression of a Streptomyces griseosporeus proteinaceous alpha-amylase inhibitor (HaimII) gene.

Authors:  H Nagaso; S Saito; H Saito; H Takahashi
Journal:  J Bacteriol       Date:  1988-10       Impact factor: 3.490

7.  Streptomyces coelicolor A3(2) lacks a genomic island present in the chromosome of Streptomyces lividans 66.

Authors:  Xiufen Zhou; Xinyi He; Aiying Li; Fang Lei; Tobias Kieser; Zixin Deng
Journal:  Appl Environ Microbiol       Date:  2004-12       Impact factor: 4.792

8.  Purification and characterization of a novel enzyme, alpha-neoagarooligosaccharide hydrolase (alpha-NAOS hydrolase), from a marine bacterium, Vibrio sp. strain JT0107.

Authors:  Y Sugano; H Kodama; I Terada; Y Yamazaki; M Noma
Journal:  J Bacteriol       Date:  1994-11       Impact factor: 3.490

9.  Computer assisted identification and classification of streptomycete promoters.

Authors:  W R Bourn; B Babb
Journal:  Nucleic Acids Res       Date:  1995-09-25       Impact factor: 16.971

10.  Identification of a complex operator for galP1, the glucose-sensitive, galactose-dependent promoter of the Streptomyces galactose operon.

Authors:  S G Mattern; M E Brawner; J Westpheling
Journal:  J Bacteriol       Date:  1993-03       Impact factor: 3.490

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