Literature DB >> 17155100

Dynamics of semiflexible polymers in a flow field.

Tobias Munk1, Oskar Hallatschek, Chris H Wiggins, Erwin Frey.   

Abstract

We present a method to investigate the dynamics of a single semiflexible polymer, subject to anisotropic friction in a viscous fluid. In contrast to previous approaches, we do not rely on a discrete bead-rod model, but introduce a suitable normal mode decomposition of a continuous space curve. By means of a perturbation expansion for stiff filaments, we derive a closed set of coupled Langevin equations in mode space for the nonlinear dynamics in two dimensions, taking into account exactly the local constraint of inextensibility. The stochastic differential equations obtained this way are solved numerically, with parameters adjusted to describe the motion of actin filaments. As an example, we show results for the tumbling motion in shear flow.

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Year:  2006        PMID: 17155100     DOI: 10.1103/PhysRevE.74.041911

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  4 in total

1.  Morphological transitions of elastic filaments in shear flow.

Authors:  Yanan Liu; Brato Chakrabarti; David Saintillan; Anke Lindner; Olivia du Roure
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-04       Impact factor: 11.205

2.  Dynamics of the primary cilium in shear flow.

Authors:  Y-N Young; M Downs; C R Jacobs
Journal:  Biophys J       Date:  2012-08-22       Impact factor: 4.033

3.  Dynamics and fragmentation of small inextensible fibres in turbulence.

Authors:  Sofía Allende; Christophe Henry; Jérémie Bec
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2020-06-22       Impact factor: 4.226

4.  Effects of thermal noise on the transitional dynamics of an inextensible elastic filament in stagnation flow.

Authors:  Mingge Deng; Leopold Grinberg; Bruce Caswell; George Em Karniadakis
Journal:  Soft Matter       Date:  2015-06-28       Impact factor: 3.679

  4 in total

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