| Literature DB >> 17150128 |
Aaron M Stoker1, James L Cook, Keiichi Kuroki, Derek B Fox.
Abstract
BACKGROUND: Osteoarthritis (OA) is a progressive and debilitating disease that often develops from a focal lesion and may take years to clinically manifest to a complete loss of joint structure and function. Currently, there is not a cure for OA, but early diagnosis and initiation of treatment may dramatically improve the prognosis and quality of life for affected individuals. This study was designed to determine the feasibility of analyzing changes in gene expression of articular cartilage using the Pond-Nuki model two weeks after ACL-transection in dogs, and to characterize the changes observed at this time point.Entities:
Year: 2006 PMID: 17150128 PMCID: PMC1636033 DOI: 10.1186/1749-799X-1-8
Source DB: PubMed Journal: J Orthop Surg Res ISSN: 1749-799X Impact factor: 2.359
Figure 1Regions of the Femoral Condyle and Tibial Plateau utilized for tissue harvest. Tissue samples were taken from each region for biochemical and gene expression analysis.
Primer sets used for Real-Time PCR analysis
| Gene | Orientation | Primer Sequence | Amplicon Size | Melt Temp |
| GAPDH | FOR | GTGACTTCAACAGTGACACC | 152 | 84.7 |
| RC | CCTTGGAGGCCATGTAGACC | |||
| Aggrecan | FOR | ATCGAAGGGGACTTCCGCTG | 106 | 84.5 |
| RC | ATCACCACACAGTCCTCTCCG | |||
| COL 2 | FOR | GGCCTGTCTGCTTCTTGTAA | 197 | 83.3 |
| RC | ATCAGGTCAGGTCAGCCATT | |||
| COL 1 | FOR | TGCACGAGTCACACTGGAGC | 124 | 85.5 |
| RC | ATGCCGAATTCCTGGTCTGG | |||
| TIMP 1 | FOR | GCAGAAGTCAACCAGACCGA | 311 | 86.2 |
| RC | GCAAGTATCCGCAGACGCTC | |||
| TIMP 2 | FOR | AACGGCAAGATGCACATCAC | 142 | 85.5 |
| RC | ATATAGCACGGGATCATGGG | |||
| INOS | FOR | GCTATGCTGGCTACCAGATG | 139 | 88.3 |
| RC | ATCAGCCTGCAGCACCAGAG | |||
| COX-2 | FOR | ACACTCTACCACTGGCATCC | 196 | 83.5 |
| RC | GCTACTTGTTGTACTGCAGC | |||
| MMP-1 | FOR | CCTAGAACCGTGAAGAGCAT | 150 | 80 |
| RC | CAGGAAAGTCAGCTGCTATC | |||
| MMP 3 | FOR | ATGGCATCCAGTCCCTGTAT | 161 | 86.5 |
| RC | AAAGAACAGGAACTCTCCCC | |||
| MMP 13 | FOR | TCTGGTCTTCTGGCTCATGC | 141 | 82.7 |
| RC | GGTCAAGACCTAAGGAGTGG | |||
| ADAMTS4 | FOR | CATCACTGAGTTCCTGGACA | 106 | 84.5 |
| RC | CGATCAGCGTCATAGTCCTT | |||
| ADAMTS5 | FOR | TGACTTCTTGCATGGCATGG | 120 | 81.5 |
| RC | CTGGCATGGCTGGTGACTGA |
Canine primer sets used for real-time PCR analysis. The annealing temperature used for all analysis was 57°C. The melt temperature for the amplicon was obtained from the Rotorgene software and is indicative of a specific PCR reaction.
Figure 2Hydroxyproline content of cartilage by region. The HP content of each cartilage region from the ACL-X joint was compared to the corresponding region in the contralateral control joint. Significant differences were not observed in the HP content of the tissues between ACL-X and control joints for any of the regions tested. Error bars indicate standard error of the mean. Values are μg of HP/mg of tissue wet weight.
Figure 3Sulfated glycosaminoglycan content of cartilage by region. The GAG content of each cartilage region from the ACL-X joint was compared to the corresponding region in the contralateral control joint. Significant differences were not observed in the GAG content of the tissues between ACL-X and control joints for any of the regions tested. Error bars indicate standard error of the mean. Values are μg of GAG/mg of tissue wet weight.
Differentially expressed genes in the ACL-X knee by region in the femoral chondyle
| <0.05 | 11.1 ± 1.71 | 0.57 ± 0.27 | COL 1 | MMP 13 | 0.096 ± 0.061 | 0.006 ± 0.002 | <0.05 |
| <0.05 | 859 ± 229 | 298 ± 212 | Aggrecan | COX-2 | 0.017 ± 0.012 | 0.001 ± 0.001 | <0.05 |
| <0.05 | 0.075 ± 0.032 | 0 ± 0 | MMP 13 | ||||
| <0.05 | 0.106 ± 0.092 | 0.001 ± 0.001 | COX-2 | ||||
| <0.05 | 50.8 ± 18.8 | 16.8 ± 11.9 | TIMP-1 | ||||
| <0.05 | 10.4 ± 6.8 | 0.744 ± 0.224 | MMP 3 | ||||
| 0.0555 | 0.853 ± 0.714 | 0.01 ± 0.006 | ADAMTS 5 | ||||
| <0.05 | 709 ± 659 | 4.32 ± 0.35 | COL 1 | Aggrecan | 370 ± 262 | 98 ± 23 | <0.05 |
| <0.05 | 1.224 ± 1.189 | 0.006 ± 0.001 | MMP 13 | ||||
| <0.05 | 0.009 ± 0.005 | 0.001 ± 0.001 | COX-2 | ||||
| <0.05 | 0.055 ± 0.028 | 0.016 ± 0.013 | ADAMTS 5 | ||||
Differentially expressed genes in the ACL-X knee by region in the femoral chondyle compared to the contralateral normal control. All genes listed were up regulated in the ACL-transected side. Values listed are the mean relative level of expression for each gene (± standard error) compared to the house keeping gene GAPDH. The increase in ADAMTS 5 gene expression in the CrMFC approached significance and was included in the table. Significant differences were determined using REST-XL, and relative expression levels were determined using Q-Gene.
Differentially expressed genes in the ACL-X knee by region in the tibial plateau
| <0.05 | 0.093 ± 0.02 | 0.018 ± 0.018 | MMP 13 | COL 1 | 5.46 ± 3.96 | 0.48 ± 0.08 | <0.05 |
| COL 2 | 1022 ± 651 | 254 ± 84 | <0.05 | ||||
| MMP 13 | 0.147 ± 0.012 | 0 ± 0 | <0.05 | ||||
| INOS | 0.362 ± 0.065 | 0.04 ± 0.04 | <0.05 | ||||
| COX-2 | 0.007 ± 0.005 | 0 ± 0 | <0.05 | ||||
| TIMP-1 | 35.3 ± 4.6 | 8.4 ± 5.4 | <0.05 | ||||
| MMP 3 | 2.428 ± 1.272 | 0.587 ± 0.18 | <0.05 | ||||
| ADAMTS 5 | 0.132 ± 0.05 | 0.024 ± 0.024 | <0.05 | ||||
| <0.05 | 378.6 ± 321.42 | 9.05 ± 7.08 | COL 1 | COL 1 | 78.85 ± 43.79 | 1.98 ± 1.72 | <0.05 |
| <0.05 | 2787 ± 1919 | 594 ± 151 | COL 2 | COL 2 | 1926 ± 939 | 708 ± 49 | <0.05 |
| <0.05 | 0.074 ± 0.059 | 0.007 ± 0.007 | MMP 13 | MMP 13 | 0.05 ± 0.002 | 0.011 ± 0.011 | <0.05 |
| <0.05 | 0.051 ± 0.044 | 0.003 ± 0.001 | COX-2 | COX-2 | 0.019 ± 0.006 | 0.002 ± 0.002 | <0.05 |
| <0.05 | 0.189 ± 0.019 | 0.088 ± 0.002 | INOS | ||||
| <0.05 | 0.023 ± 0.011 | 0.002 ± 0.002 | ADAMTS 5 | ||||
| <0.05 | 1.4 ± 0.07 | 3.71 ± 0.08 | TIMP-2 | TIMP-2 | 0.99 ± 0.02 | 2.7 ± 0.8 | <0.05 |
Differentially expressed genes in the ACL-transected knee by region in the tibial plateau compared to the contralateral normal control. All genes listed were up regulated in the ACL-transected stifle except TIMP-2, which was down regulated in the ACL-transected stifle. Values listed are the mean relative level of expression (± standard error) for each gene compared to the house keeping gene GAPDH. Significant differences were determined using REST-XL, and relative expression levels were determined using Q-Gene.
Figure 4Differentially expressed genes by region. Graphical representation of genes differentially expressed by region in the tibial plateau (A) and femoral condyle (B). Increasing shade of red indicates an increased number of genes differentially expressed in that region. * ADAMTS 5 gene expression approached significance (p = .055)