Literature DB >> 17141394

Type IA topoisomerases: a simple puzzle?

Thierry Viard1, Claire Bouthier de la Tour.   

Abstract

Type IA topoisomerases are enzymes that can modify DNA topology. They form a distinct family of proteins present in all domains of life, from bacteria to archaea and higher eukaryotes. They are composed of two domains: a core domain containing all the conserved motifs involved in the trans-esterification reactions, and a carboxyl-terminal domain that is highly variable in size and sequence. The latter appears to interact with other proteins, defining the physiological use of the topoisomerase activity. The evolutionary relevance of this topoisomerase-cofactor complex, also known as the "toposome", as well as its enzymatic consequences are discussed in this review.

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Year:  2006        PMID: 17141394     DOI: 10.1016/j.biochi.2006.10.013

Source DB:  PubMed          Journal:  Biochimie        ISSN: 0300-9084            Impact factor:   4.079


  38 in total

1.  Coral-mucus-associated Vibrio integrons in the Great Barrier Reef: genomic hotspots for environmental adaptation.

Authors:  Jeremy E Koenig; David G Bourne; Bruce Curtis; Marlena Dlutek; H W Stokes; W Ford Doolittle; Yan Boucher
Journal:  ISME J       Date:  2011-01-27       Impact factor: 10.302

2.  Synergic and opposing activities of thermophilic RecQ-like helicase and topoisomerase 3 proteins in Holliday junction processing and replication fork stabilization.

Authors:  Anna Valenti; Mariarita De Felice; Giuseppe Perugino; Anna Bizard; Marc Nadal; Mosè Rossi; Maria Ciaramella
Journal:  J Biol Chem       Date:  2012-06-21       Impact factor: 5.157

3.  Hydroxyl radicals are involved in cell killing by the bacterial topoisomerase I cleavage complex.

Authors:  I-Fen Liu; Thirunavukkarasu Annamalai; Jeanette H Sutherland; Yuk-Ching Tse-Dinh
Journal:  J Bacteriol       Date:  2009-06-12       Impact factor: 3.490

Review 4.  The dissolution of double Holliday junctions.

Authors:  Anna H Bizard; Ian D Hickson
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-07-01       Impact factor: 10.005

5.  Structural and mechanistic insight into Holliday-junction dissolution by topoisomerase IIIα and RMI1.

Authors:  Nicolas Bocquet; Anna H Bizard; Wassim Abdulrahman; Nicolai B Larsen; Mahamadou Faty; Simone Cavadini; Richard D Bunker; Stephen C Kowalczykowski; Petr Cejka; Ian D Hickson; Nicolas H Thomä
Journal:  Nat Struct Mol Biol       Date:  2014-02-09       Impact factor: 15.369

6.  Crystal structure of a covalent intermediate in DNA cleavage and rejoining by Escherichia coli DNA topoisomerase I.

Authors:  Zhongtao Zhang; Bokun Cheng; Yuk-Ching Tse-Dinh
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-11       Impact factor: 11.205

Review 7.  Drugging topoisomerases: lessons and challenges.

Authors:  Yves Pommier
Journal:  ACS Chem Biol       Date:  2013-01-04       Impact factor: 5.100

8.  Metal ion and inter-domain interactions as functional networks in E. coli topoisomerase I.

Authors:  Claudia Sissi; Bokun Cheng; Valentina Lombardo; Yuk-Ching Tse-Dinh; Manlio Palumbo
Journal:  Gene       Date:  2013-04-20       Impact factor: 3.688

9.  The DNA relaxation activity and covalent complex accumulation of Mycobacterium tuberculosis topoisomerase I can be assayed in Escherichia coli: application for identification of potential FRET-dye labeling sites.

Authors:  Gagandeep Narula; Jennifer Becker; Bokun Cheng; Neil Dani; Maria V Abrenica; Yuk-Ching Tse-Dinh
Journal:  BMC Biochem       Date:  2010-09-30       Impact factor: 4.059

10.  Decatenation of DNA by the S. cerevisiae Sgs1-Top3-Rmi1 and RPA complex: a mechanism for disentangling chromosomes.

Authors:  Petr Cejka; Jody L Plank; Christopher C Dombrowski; Stephen C Kowalczykowski
Journal:  Mol Cell       Date:  2012-08-09       Impact factor: 17.970

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