Literature DB >> 17139256

Multiple mechanisms are involved in regulating the expression of the developmental timing regulator lin-28 in Caenorhabditis elegans.

Kiyokazu Morita1, Min Han.   

Abstract

The timing of postembryonic developmental programs in Caenorhabditis elegans is regulated by a set of so-called heterochronic genes, including lin-28 that specifies second larval programs. lin-66 mutations described herein cause delays in vulval and seam cell differentiation, indicating a role for lin-66 in timing regulation. A mutation in daf-12/nuclear receptor or alg-1/argonaute dramatically enhances the retarded phenotypes of the lin-66 mutants, and these phenotypes are suppressed by a lin-28 null allele. We further show that the LIN-28 protein level is upregulated in the lin-66 mutants and that this regulation is mediated by the 3'UTR of lin-28. We have also identified a potential daf-12-response element within lin-28 3'UTR and show that two microRNA (miRNA) (lin-4 and let-7)-binding sites mediate redundant inhibitory activities that are likely lin-66-independent. Quantitative PCR data suggest that the lin-28 mRNA level is affected by lin-14 and miRNA regulation, but not by daf-12 and lin-66 regulation. These results suggest that lin-28 expression is regulated by multiple independent mechanisms including LIN-14-mediated upregulation of mRNA level, miRNAs-mediated RNA degradation, LIN-66-mediated translational inhibition and DAF-12-involved translation promotion.

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Year:  2006        PMID: 17139256      PMCID: PMC1698897          DOI: 10.1038/sj.emboj.7601451

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  38 in total

1.  Two genetic circuits repress the Caenorhabditis elegans heterochronic gene lin-28 after translation initiation.

Authors:  Kathy Seggerson; Lingjuan Tang; Eric G Moss
Journal:  Dev Biol       Date:  2002-03-15       Impact factor: 3.582

2.  Rapid gene mapping in Caenorhabditis elegans using a high density polymorphism map.

Authors:  S R Wicks; R T Yeh; W R Gish; R H Waterston; R H Plasterk
Journal:  Nat Genet       Date:  2001-06       Impact factor: 38.330

3.  The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans.

Authors:  B J Reinhart; F J Slack; M Basson; A E Pasquinelli; J C Bettinger; A E Rougvie; H R Horvitz; G Ruvkun
Journal:  Nature       Date:  2000-02-24       Impact factor: 49.962

4.  daf-12 encodes a nuclear receptor that regulates the dauer diapause and developmental age in C. elegans.

Authors:  A Antebi; W H Yeh; D Tait; E M Hedgecock; D L Riddle
Journal:  Genes Dev       Date:  2000-06-15       Impact factor: 11.361

5.  Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing.

Authors:  A Grishok; A E Pasquinelli; D Conte; N Li; S Parrish; I Ha; D L Baillie; A Fire; G Ruvkun; C C Mello
Journal:  Cell       Date:  2001-07-13       Impact factor: 41.582

6.  The cold shock domain protein LIN-28 controls developmental timing in C. elegans and is regulated by the lin-4 RNA.

Authors:  E G Moss; R C Lee; V Ambros
Journal:  Cell       Date:  1997-03-07       Impact factor: 41.582

Review 7.  Control of developmental timing in animals.

Authors:  A E Rougvie
Journal:  Nat Rev Genet       Date:  2001-09       Impact factor: 53.242

Review 8.  Control of developmental timing by micrornas and their targets.

Authors:  Amy E Pasquinelli; Gary Ruvkun
Journal:  Annu Rev Cell Dev Biol       Date:  2002-04-02       Impact factor: 13.827

9.  ELT-5 and ELT-6 are required continuously to regulate epidermal seam cell differentiation and cell fusion in C. elegans.

Authors:  K Koh; J H Rothman
Journal:  Development       Date:  2001-08       Impact factor: 6.868

10.  EGL-17(FGF) expression coordinates the attraction of the migrating sex myoblasts with vulval induction in C. elegans.

Authors:  R D Burdine; C S Branda; M J Stern
Journal:  Development       Date:  1998-03       Impact factor: 6.868

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  33 in total

1.  Systematic identification of C. elegans miRISC proteins, miRNAs, and mRNA targets by their interactions with GW182 proteins AIN-1 and AIN-2.

Authors:  Liang Zhang; Lei Ding; Tom H Cheung; Meng-Qiu Dong; Jun Chen; Aileen K Sewell; Xuedong Liu; John R Yates; Min Han
Journal:  Mol Cell       Date:  2007-11-30       Impact factor: 17.970

2.  Uncoupling of lin-14 mRNA and protein repression by nutrient deprivation in Caenorhabditis elegans.

Authors:  Janette Holtz; Amy E Pasquinelli
Journal:  RNA       Date:  2009-01-20       Impact factor: 4.942

Review 3.  Caenorhabditis elegans nuclear receptors: insights into life traits.

Authors:  Daniel B Magner; Adam Antebi
Journal:  Trends Endocrinol Metab       Date:  2008-04-10       Impact factor: 12.015

4.  Control of stem cell self-renewal and differentiation by the heterochronic genes and the cellular asymmetry machinery in Caenorhabditis elegans.

Authors:  Omid F Harandi; Victor R Ambros
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-05       Impact factor: 11.205

Review 5.  MicroRNAs in IgA nephropathy.

Authors:  Cheuk-Chun Szeto; Philip K-T Li
Journal:  Nat Rev Nephrol       Date:  2014-04-08       Impact factor: 28.314

6.  Loss of individual microRNAs causes mutant phenotypes in sensitized genetic backgrounds in C. elegans.

Authors:  John L Brenner; Kristen L Jasiewicz; Alisha F Fahley; Benedict J Kemp; Allison L Abbott
Journal:  Curr Biol       Date:  2010-06-24       Impact factor: 10.834

7.  A Rapid Induction Mechanism for Lin28a in Trophic Responses.

Authors:  Alexandra M Amen; Claudia R Ruiz-Garzon; Jay Shi; Megha Subramanian; Daniel L Pham; Mollie K Meffert
Journal:  Mol Cell       Date:  2017-01-26       Impact factor: 17.970

8.  Dauer larva quiescence alters the circuitry of microRNA pathways regulating cell fate progression in C. elegans.

Authors:  Xantha Karp; Victor Ambros
Journal:  Development       Date:  2012-06       Impact factor: 6.868

Review 9.  Tag team: Roles of miRNAs and Proteolytic Regulators in Ensuring Robust Gene Expression Dynamics.

Authors:  Benjamin P Weaver; Min Han
Journal:  Trends Genet       Date:  2017-10-13       Impact factor: 11.639

Review 10.  miRNAs give worms the time of their lives: small RNAs and temporal control in Caenorhabditis elegans.

Authors:  Tamar D Resnick; Katherine A McCulloch; Ann E Rougvie
Journal:  Dev Dyn       Date:  2010-05       Impact factor: 3.780

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