Literature DB >> 17134242

SCRF-DFT and NMR comparison of tetracycline and 5a,6-anhydrotetracycline in solution.

Olaf G Othersen1, Reiner Waibel, Harald Lanig, Peter Gmeiner, Timothy Clark.   

Abstract

A combination of structures, energies, and spectral data calculated using density functional theory (DFT) with experimental NMR data has been used to assign conformational equilibria for tetracycline and 5a,6-anhydrotetracycline in water at pH 1, 7, and 10 and in chloroform (5a,6-anhydrotetracycline) and methanol (tetracycline). The results suggest that tetracycline always prefers the extended conformation but that 5a,6-anhydrotetracycline exists in water as a mixture of the two conformers and in chloroform exclusively in the twisted conformation. The conformational equilibria are also shown to be pH dependent.

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Year:  2006        PMID: 17134242     DOI: 10.1021/jp064457s

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  4 in total

1.  Tautomers and reference 3D-structures: the orphans of in silico drug design.

Authors:  Timothy Clark
Journal:  J Comput Aided Mol Des       Date:  2010-03-27       Impact factor: 3.686

2.  Structural characterization of an alternative mode of tigecycline binding to the bacterial ribosome.

Authors:  Andreas Schedlbauer; Tatsuya Kaminishi; Borja Ochoa-Lizarralde; Neha Dhimole; Shu Zhou; Jorge P López-Alonso; Sean R Connell; Paola Fucini
Journal:  Antimicrob Agents Chemother       Date:  2015-03-09       Impact factor: 5.191

3.  The structure of 5a,6-anhydrotetracycline and its Mg2+ complexes in aqueous solution.

Authors:  Olaf G Othersen; Harald Lanig; Timothy Clark
Journal:  J Mol Model       Date:  2006-05-03       Impact factor: 1.810

4.  Luminescent and Chiroptical Properties of 1 : 1 Eu (III) : Tetracycline Species Probed by Circularly Polarized Luminescence.

Authors:  Kirandeep K Deol; Gilles Muller
Journal:  Chempluschem       Date:  2019-11-22       Impact factor: 2.863

  4 in total

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