Literature DB >> 17132902

Epigenetic diagnostics of cancer--the application of DNA methylation markers.

Jaroslaw Paluszczak1, Wanda Baer-Dubowska.   

Abstract

In recent years it has become apparent that epigenetic events are potentially equally responsible for cancer initiation and progression as genetic abnormalities. DNA methylation is the main epigenetic modification in humans. Two DNA methylation lesions coexist in human neoplasms: hypermethylation of promoter regions of specific genes within a context of genomic hypomethylation. Aberrant methylation is found at early stages of carcinogenesis and distinct types of cancer exhibit specific patterns of methylation changes. Tumor specific DNA is readily obtainable from different clinical samples and methylation status analysis often permits sensitive disease detection. Methylation markers may also serve for prognostic and predictive purposes as they often reflect the metastatic potential and sensitivity to therapy. As current findings show a great potential of recently characterised methylation markers, more studies in the field are needed in the future. Large clinical studies of newly developed markers are especially needed. The review describes the diagnostic potential of DNA methylation markers.

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Year:  2006        PMID: 17132902     DOI: 10.1007/BF03194647

Source DB:  PubMed          Journal:  J Appl Genet        ISSN: 1234-1983            Impact factor:   3.240


  85 in total

Review 1.  Detection and interpretation of altered methylation patterns in cancer cells.

Authors:  Toshikazu Ushijima
Journal:  Nat Rev Cancer       Date:  2005-03       Impact factor: 60.716

2.  Hypermethylation of the calcitonin gene in acute lymphoblastic leukaemia is associated with unfavourable clinical outcome.

Authors:  J Roman; J A Castillejo; A Jimenez; R Bornstein; M G Gonzalez; M del Carmen Rodriguez; M Barrios; J Maldonado; A Torres
Journal:  Br J Haematol       Date:  2001-05       Impact factor: 6.998

3.  Methylation discriminators in NSCLC identified by a microarray based approach.

Authors:  J K Field; T Liloglou; S Warrak; M Burger; E Becker; K Berlin; I Nimmrich; S Maier
Journal:  Int J Oncol       Date:  2005-07       Impact factor: 5.650

4.  Identification of epigenetic aberrant promoter methylation in serum DNA is useful for early detection of lung cancer.

Authors:  Keiichi Fujiwara; Nobukazu Fujimoto; Masahiro Tabata; Kenji Nishii; Keitaro Matsuo; Katsuyuki Hotta; Toshiyuki Kozuki; Motoi Aoe; Katsuyuki Kiura; Hiroshi Ueoka; Mitsune Tanimoto
Journal:  Clin Cancer Res       Date:  2005-02-01       Impact factor: 12.531

5.  Molecular detection of p16 promoter methylation in the serum of recurrent colorectal cancer patients.

Authors:  Hiroshi Nakayama; Kenji Hibi; Tsunenobu Takase; Taiji Yamazaki; Yasushi Kasai; Katsuki Ito; Seiji Akiyama; Akimasa Nakao
Journal:  Int J Cancer       Date:  2003-07-01       Impact factor: 7.396

6.  Methylation of p15 and p16 genes in acute promyelocytic leukemia: potential diagnostic and prognostic significance.

Authors:  C S Chim; R Liang; C Y Tam; Y L Kwong
Journal:  J Clin Oncol       Date:  2001-04-01       Impact factor: 44.544

Review 7.  Identifying DNA methylation biomarkers of cancer drug response.

Authors:  Sabine Maier; Christina Dahlstroem; Carolina Haefliger; Achim Plum; Christian Piepenbrock
Journal:  Am J Pharmacogenomics       Date:  2005

8.  Promoter hypomethylation of a novel cancer/testis antigen gene CAGE is correlated with its aberrant expression and is seen in premalignant stage of gastric carcinoma.

Authors:  Bomsoo Cho; Hansoo Lee; ShinWu Jeong; Yung-Jue Bang; Hyun Joo Lee; Kyu Sang Hwang; Hae-Yeong Kim; Yun-Sil Lee; Gyeong Hoon Kang; Doo-Il Jeoung
Journal:  Biochem Biophys Res Commun       Date:  2003-07-18       Impact factor: 3.575

9.  Association of breast cancer DNA methylation profiles with hormone receptor status and response to tamoxifen.

Authors:  Martin Widschwendter; Kimberly D Siegmund; Hannes M Müller; Heidi Fiegl; Christian Marth; Elisabeth Müller-Holzner; Peter A Jones; Peter W Laird
Journal:  Cancer Res       Date:  2004-06-01       Impact factor: 12.701

10.  Role of promoter hypermethylation in Cisplatin treatment response of male germ cell tumors.

Authors:  Sanjay Koul; James M McKiernan; Gopeshwar Narayan; Jane Houldsworth; Jennifer Bacik; Deborah L Dobrzynski; Adel M Assaad; Mahesh Mansukhani; Victor E Reuter; George J Bosl; Raju S K Chaganti; Vundavalli V V S Murty
Journal:  Mol Cancer       Date:  2004-05-18       Impact factor: 27.401

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  37 in total

1.  Hypermethylation of CpG islands is more prevalent than hypomethylation across the entire genome in breast carcinogenesis.

Authors:  Jianxin Tan; Yumei Gu; Xiaomei Zhang; Sihong You; Xiaowei Lu; Senqing Chen; Xiao Han; Yujie Sun
Journal:  Clin Exp Med       Date:  2012-01-04       Impact factor: 3.984

2.  Genetic aberrations in childhood acute lymphoblastic leukaemia: application of high-density single nucleotide polymorphism array.

Authors:  Sarina Sulong
Journal:  Malays J Med Sci       Date:  2010-07

3.  A proof-of-principle demonstration of a novel microarray-based method for quantifying DNA methylation levels.

Authors:  Xiujuan Zhang; Dongrui Zhou; Ming Zhao; Yongqi Luo; Peng Zhang; Zuhong Lu; Qianjin Lu
Journal:  Mol Biotechnol       Date:  2010-11       Impact factor: 2.695

Review 4.  Biomarkers of Helicobacter pylori-associated gastric cancer.

Authors:  Cara L Cooke; Javier Torres; Jay V Solnick
Journal:  Gut Microbes       Date:  2013-07-12

5.  Frequency variations in the methylated pattern of p73/p21 genes and chromosomal aberrations correlating with different grades of glioma among south Indian population.

Authors:  Mahalakshmi Palani; Sabarinathan Devan; R Arunkumar; A J Vanisree
Journal:  Med Oncol       Date:  2010-09-16       Impact factor: 3.064

Review 6.  Surfactant protein DNA methylation: a new entrant in the field of lung cancer diagnostics? (Review).

Authors:  Mudit Vaid; Joanna Floros
Journal:  Oncol Rep       Date:  2009-01       Impact factor: 3.906

7.  Massively parallel bisulphite pyrosequencing reveals the molecular complexity of breast cancer-associated cytosine-methylation patterns obtained from tissue and serum DNA.

Authors:  Yulia Korshunova; Rebecca K Maloney; Nathan Lakey; Robert W Citek; Blaire Bacher; Arief Budiman; Jared M Ordway; W Richard McCombie; Jorge Leon; Jeffrey A Jeddeloh; John D McPherson
Journal:  Genome Res       Date:  2007-11-21       Impact factor: 9.043

8.  The regulation of non-coding RNA expression in the liver of mice fed DDC.

Authors:  Joan Oliva; Fawzia Bardag-Gorce; Barbara A French; Jun Li; Samuel W French
Journal:  Exp Mol Pathol       Date:  2009-04-09       Impact factor: 3.362

9.  Genetic variation and its role in malignancy.

Authors:  Bente A Talseth-Palmer; Rodney J Scott
Journal:  Int J Biomed Sci       Date:  2011-09

10.  The increased expression and aberrant methylation of SHC1 in non-small cell lung cancer: Integrative analysis of clinical and bioinformatics databases.

Authors:  Yicheng Liang; Yangyang Lei; Minjun Du; Mei Liang; Zixu Liu; Xingkai Li; Yushun Gao
Journal:  J Cell Mol Med       Date:  2021-06-11       Impact factor: 5.310

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