Literature DB >> 17130443

Disequilibrium and association in barley: thinking outside the glass.

Patrick Hayes1, Péter Szucs.   

Abstract

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Year:  2006        PMID： 17130443      PMCID： PMC1693672          DOI： 10.1073/pnas.0609405103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


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  9 in total

1.  Cytologically integrated physical restriction fragment length polymorphism maps for the barley genome based on translocation breakpoints.

Authors:  G Künzel; L Korzun; A Meister
Journal:  Genetics       Date:  2000-01       Impact factor: 4.562

Review 2.  Genome-wide association studies for common diseases and complex traits.

Authors:  Joel N Hirschhorn; Mark J Daly
Journal:  Nat Rev Genet       Date:  2005-02       Impact factor: 53.242

Review 3.  Linkage disequilibrium and association studies in higher plants: present status and future prospects.

Authors:  Pushpendra K Gupta; Sachin Rustgi; Pawan L Kulwal
Journal:  Plant Mol Biol       Date:  2005-03       Impact factor: 4.076

Review 4.  Genetic dissection of complex traits.

Authors:  E S Lander; N J Schork
Journal:  Science       Date:  1994-09-30       Impact factor: 47.728

5.  Arabidopsis thaliana CBF1 encodes an AP2 domain-containing transcriptional activator that binds to the C-repeat/DRE, a cis-acting DNA regulatory element that stimulates transcription in response to low temperature and water deficit.

Authors:  E J Stockinger; S J Gilmour; M F Thomashow
Journal:  Proc Natl Acad Sci U S A       Date:  1997-02-04       Impact factor: 11.205

6.  Validation of the VRN-H2/VRN-H1 epistatic model in barley reveals that intron length variation in VRN-H1 may account for a continuum of vernalization sensitivity.

Authors:  Péter Szucs; Jeffrey S Skinner; Ildikó Karsai; Alfonso Cuesta-Marcos; Kale G Haggard; Ann E Corey; Tony H H Chen; Patrick M Hayes
Journal:  Mol Genet Genomics       Date:  2006-12-07       Impact factor: 3.291

7.  Molecular and structural characterization of barley vernalization genes.

Authors:  Jarislav von Zitzewitz; Péter Szucs; Jorge Dubcovsky; Liuling Yan; Enrico Francia; Nicola Pecchioni; Ana Casas; Tony H H Chen; Patrick M Hayes; Jeffrey S Skinner
Journal:  Plant Mol Biol       Date:  2005-10       Impact factor: 4.076

8.  Recent history of artificial outcrossing facilitates whole-genome association mapping in elite inbred crop varieties.

Authors:  Nils Rostoks; Luke Ramsay; Katrin MacKenzie; Linda Cardle; Prasanna R Bhat; Mikeal L Roose; Jan T Svensson; Nils Stein; Rajeev K Varshney; David F Marshall; Andreas Graner; Timothy J Close; Robbie Waugh
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-03       Impact factor: 11.205

9.  Mapping of barley homologs to genes that regulate low temperature tolerance in Arabidopsis.

Authors:  Jeffrey S Skinner; Péter Szucs; Jarislav von Zitzewitz; Luis Marquez-Cedillo; Tanya Filichkin; Eric J Stockinger; Michael F Thomashow; Tony H H Chen; Patrick M Hayes
Journal:  Theor Appl Genet       Date:  2005-12-20       Impact factor: 5.574
  9 in total
  16 in total

1.  Association mapping reveals gene action and interactions in the determination of flowering time in barley.

Authors:  Silke Stracke; Grit Haseneyer; Jean-Baptiste Veyrieras; Hartwig H Geiger; Sascha Sauer; Andreas Graner; Hans-Peter Piepho
Journal:  Theor Appl Genet       Date:  2008-10-02       Impact factor: 5.699

2.  Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data.

Authors:  M Moragues; J Comadran; R Waugh; I Milne; A J Flavell; Joanne R Russell
Journal:  Theor Appl Genet       Date:  2010-02-16       Impact factor: 5.699

3.  Genome-wide association studies of agronomic and quality traits in a set of German winter barley (Hordeum vulgare L.) cultivars using Diversity Arrays Technology (DArT).

Authors:  Jeannette Lex; Jutta Ahlemeyer; Wolfgang Friedt; Frank Ordon
Journal:  J Appl Genet       Date:  2014-05-01       Impact factor: 3.240

4.  Multi-environment multi-QTL association mapping identifies disease resistance QTL in barley germplasm from Latin America.

Authors:  Lucia Gutiérrez; Silvia Germán; Silvia Pereyra; Patrick M Hayes; Carlos A Pérez; Flavio Capettini; Andres Locatelli; Natalia M Berberian; Esteban E Falconi; Rigoberto Estrada; Dario Fros; Victor Gonza; Hernan Altamirano; Julio Huerta-Espino; Edgar Neyra; Gisella Orjeda; Sergio Sandoval-Islas; Ravi Singh; Kelly Turkington; Ariel J Castro
Journal:  Theor Appl Genet       Date:  2014-12-30       Impact factor: 5.699

5.  Development and assessment of simple PCR markers for SNP genotyping in barley.

Authors:  Matthew J Hayden; T Tabone; D E Mather
Journal:  Theor Appl Genet       Date:  2009-07-12       Impact factor: 5.699

6.  Genetic variants of HvCbf14 are statistically associated with frost tolerance in a European germplasm collection of Hordeum vulgare.

Authors:  Agostino Fricano; Fulvia Rizza; Primetta Faccioli; Donata Pagani; Paolo Pavan; Alessandra Stella; Laura Rossini; Pietro Piffanelli; Luigi Cattivelli
Journal:  Theor Appl Genet       Date:  2009-11       Impact factor: 5.699

7.  Exploiting regulatory variation to identify genes underlying quantitative resistance to the wheat stem rust pathogen Puccinia graminis f. sp. tritici in barley.

Authors:  Arnis Druka; Elena Potokina; Zewei Luo; Nicola Bonar; Ilze Druka; Ling Zhang; David F Marshall; Brian J Steffenson; Timothy J Close; Roger P Wise; Andris Kleinhofs; Robert W Williams; Michael J Kearsey; Robbie Waugh
Journal:  Theor Appl Genet       Date:  2008-04-30       Impact factor: 5.699

8.  Population structure and linkage disequilibrium in barley assessed by DArT markers.

Authors:  Li Yi Zhang; Suzanne Marchand; Nicholas A Tinker; François Belzile
Journal:  Theor Appl Genet       Date:  2009-04-03       Impact factor: 5.699

9.  Exome association analysis sheds light onto leaf rust (Puccinia triticina) resistance genes currently used in wheat breeding (Triticum aestivum L.).

Authors:  Fang Liu; Yusheng Zhao; Sebastian Beier; Yong Jiang; Patrick Thorwarth; C Friedrich H Longin; Martin Ganal; Axel Himmelbach; Jochen C Reif; Albert W Schulthess
Journal:  Plant Biotechnol J       Date:  2019-12-20       Impact factor: 9.803

10.  Genome-wide SNPs and re-sequencing of growth habit and inflorescence genes in barley: implications for association mapping in germplasm arrays varying in size and structure.

Authors:  Alfonso Cuesta-Marcos; Péter Szucs; Timothy J Close; Tanya Filichkin; Gary J Muehlbauer; Kevin P Smith; Patrick M Hayes
Journal:  BMC Genomics       Date:  2010-12-15       Impact factor: 3.969
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