Literature DB >> 17129086

Calculation of nuclear magnetic resonance shieldings using frozen-density embedding.

Christoph R Jacob1, Lucas Visscher.   

Abstract

We have extended the frozen-density embedding (FDE) scheme within density-functional theory [T. A. Wesolowski and A. Warshel, J. Phys. Chem. 97, 8050 (1993)] to include external magnetic fields and applied this extension to the nonrelativistic calculation of nuclear magnetic resonance (NMR) shieldings. This leads to a formulation in which the electron density and the induced current are calculated separately for the individual subsystems. If the current dependence of the exchange-correlation functional and of the nonadditive kinetic-energy functional are neglected, the induced currents in the subsystems are not coupled and each of them can be determined without knowledge of the induced current in the other subsystem. This allows the calculation of the NMR shielding as a sum of contributions of the individual subsystems. As a test application, we have calculated the solvent shifts of the nitrogen shielding of acetonitrile for different solvents using small geometry-optimized clusters consisting of acetonitrile and one solvent molecule. By comparing to the solvent shifts obtained from supermolecular calculations we assess the accuracy of the solvent shifts obtained from FDE calculations. We find a good agreement between supermolecular and FDE calculations for different solvents. In most cases it is possible to neglect the contribution of the induced current in the solvent subsystem to the NMR shielding, but it has to be considered for aromatic solvents. We demonstrate that FDE can describe the effect of induced currents in the environment accurately.

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Year:  2006        PMID: 17129086     DOI: 10.1063/1.2370947

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  4 in total

1.  Automated assignment of NMR chemical shifts based on a known structure and 4D spectra.

Authors:  Matthias Trautwein; Kai Fredriksson; Heiko M Möller; Thomas E Exner
Journal:  J Biomol NMR       Date:  2016-08-02       Impact factor: 2.835

2.  Toward Closing the Gap: Quantum Mechanical Calculations and Experimentally Measured Chemical Shifts of a Microcrystalline Lectin.

Authors:  Matthew Fritz; Caitlin M Quinn; Mingzhang Wang; Guangjin Hou; Xingyu Lu; Leonardus M I Koharudin; Tatyana Polenova; Angela M Gronenborn
Journal:  J Phys Chem B       Date:  2016-12-21       Impact factor: 2.991

3.  Accurate ab initio prediction of NMR chemical shifts of nucleic acids and nucleic acids/protein complexes.

Authors:  Andrea Victora; Heiko M Möller; Thomas E Exner
Journal:  Nucleic Acids Res       Date:  2014-11-17       Impact factor: 16.971

4.  Multilevel Density Functional Theory.

Authors:  Gioia Marrazzini; Tommaso Giovannini; Marco Scavino; Franco Egidi; Chiara Cappelli; Henrik Koch
Journal:  J Chem Theory Comput       Date:  2021-01-15       Impact factor: 6.006

  4 in total

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