Literature DB >> 17121607

A 2.5-Mb contig constructed from Angus, Longhorn and horned Hereford DNA spanning the polled interval on bovine chromosome 1.

K R Wunderlich1, C A Abbey, D R Clayton, Y Song, J E Schein, M Georges, W Coppieters, D L Adelson, J F Taylor, S L Davis, C A Gill.   

Abstract

The polled locus has been mapped by genetic linkage analysis to the proximal region of bovine chromosome 1. As an intermediate step in our efforts to identify the polled locus and the underlying causative mutation for the polled phenotype, we have constructed a BAC-based physical map of the interval containing the polled locus. Clones containing genes and markers in the critical interval were isolated from the TAMBT (constructed from Angus and Longhorn genomic DNA) and CHORI-240 (constructed from horned Hereford genomic DNA) BAC libraries and ordered based on fingerprinting and the presence or absence of 80 STS markers. A single contig spanning 2.5 Mb was assembled. Comparison of the physical order of STSs to the corresponding region of human chromosome 21 revealed the same order of genes within the polled critical interval. This contig of overlapping BAC clones from horned and polled breeds is a useful resource for SNP discovery and characterization of positional candidate genes.

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Year:  2006        PMID: 17121607     DOI: 10.1111/j.1365-2052.2006.01538.x

Source DB:  PubMed          Journal:  Anim Genet        ISSN: 0268-9146            Impact factor:   3.169


  7 in total

1.  A radiation hybrid map of river buffalo (Bubalus bubalis) chromosome 1 (BBU1).

Authors:  M N Miziara; T Goldammer; N B Stafuzza; P Ianella; R Agarwala; A A Schaffer; J S Elliott; P K Riggs; J E Womack; M E J Amaral
Journal:  Cytogenet Genome Res       Date:  2007-12-14       Impact factor: 1.636

2.  Transcription profiling provides insights into gene pathways involved in horn and scurs development in cattle.

Authors:  Maxy Mariasegaram; Antonio Reverter; Wes Barris; Sigrid A Lehnert; Brian Dalrymple; Kishore Prayaga
Journal:  BMC Genomics       Date:  2010-06-11       Impact factor: 3.969

3.  A quasi-exclusive European ancestry in the Senepol tropical cattle breed highlights the importance of the slick locus in tropical adaptation.

Authors:  Laurence Flori; Mary Isabel Gonzatti; Sophie Thevenon; Isabelle Chantal; Joar Pinto; David Berthier; Pedro M Aso; Mathieu Gautier
Journal:  PLoS One       Date:  2012-05-09       Impact factor: 3.240

Review 4.  A Review of Selected Genes with Known Effects on Performance and Health of Cattle.

Authors:  Eduardo Casas; Marcus E Kehrli
Journal:  Front Vet Sci       Date:  2016-12-15

5.  Single nucleotide polymorphisms concordant with the horned/polled trait in Holsteins.

Authors:  Edward J Cargill; Nick J Nissing; Michael D Grosz
Journal:  BMC Res Notes       Date:  2008-12-08

6.  A multiway analysis for identifying high integrity bovine BACs.

Authors:  Abhirami Ratnakumar; Wesley Barris; Sean McWilliam; Rudiger Brauning; John C McEwan; Warren M Snelling; Brian P Dalrymple
Journal:  BMC Genomics       Date:  2009-01-23       Impact factor: 3.969

7.  Genome-wide Association Study Identifies Loci for the Polled Phenotype in Yak.

Authors:  Chunnian Liang; Lizhong Wang; Xiaoyun Wu; Kun Wang; Xuezhi Ding; Mingcheng Wang; Min Chu; Xiuyue Xie; Qiang Qiu; Ping Yan
Journal:  PLoS One       Date:  2016-07-07       Impact factor: 3.240

  7 in total

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