Literature DB >> 17120107

Chromatin remodeling and repair of DNA double-strand breaks.

Lai-Yee Wong1, Judith Recht, Brehon C Laurent.   

Abstract

Eukaryotic cells have developed conserved mechanisms to efficiently sense and repair DNA damage that results from constant chromosomal lesions. DNA repair has to proceed in the context of chromatin, and both histone-modifiers and ATP-dependent chromatin remodelers have been implicated in this process. Here, we review the current understanding and new hypotheses on how different chromatin-modifying activities function in DNA repair in yeast and metazoan cells.

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Year:  2006        PMID: 17120107     DOI: 10.1007/s10735-006-9047-4

Source DB:  PubMed          Journal:  J Mol Histol        ISSN: 1567-2379            Impact factor:   2.611


  69 in total

1.  A role for Saccharomyces cerevisiae histone H2A in DNA repair.

Authors:  J A Downs; N F Lowndes; S P Jackson
Journal:  Nature       Date:  2000 Dec 21-28       Impact factor: 49.962

2.  A phosphatase complex that dephosphorylates gammaH2AX regulates DNA damage checkpoint recovery.

Authors:  Michael-Christopher Keogh; Jung-Ae Kim; Michael Downey; Jeffrey Fillingham; Dipanjan Chowdhury; Jacob C Harrison; Megumi Onishi; Nira Datta; Sarah Galicia; Andrew Emili; Judy Lieberman; Xuetong Shen; Stephen Buratowski; James E Haber; Daniel Durocher; Jack F Greenblatt; Nevan J Krogan
Journal:  Nature       Date:  2005-11-20       Impact factor: 49.962

3.  Histone acetylation by Trrap-Tip60 modulates loading of repair proteins and repair of DNA double-strand breaks.

Authors:  Rabih Murr; Joanna I Loizou; Yun-Gui Yang; Cyrille Cuenin; Hai Li; Zhao-Qi Wang; Zdenko Herceg
Journal:  Nat Cell Biol       Date:  2005-12-11       Impact factor: 28.824

4.  A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response.

Authors:  Hiroshi Masumoto; David Hawke; Ryuji Kobayashi; Alain Verreault
Journal:  Nature       Date:  2005-07-14       Impact factor: 49.962

5.  Histone chaperone Asf1 is required for histone H3 lysine 56 acetylation, a modification associated with S phase in mitosis and meiosis.

Authors:  J Recht; T Tsubota; J C Tanny; R L Diaz; J M Berger; X Zhang; B A Garcia; J Shabanowitz; A L Burlingame; D F Hunt; P D Kaufman; C D Allis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-20       Impact factor: 11.205

6.  Cancer-associated mutations in chromatin remodeler hSNF5 promote chromosomal instability by compromising the mitotic checkpoint.

Authors:  Robert G J Vries; Vladimir Bezrookove; Lobke M P Zuijderduijn; Sima Kheradmand Kia; Ada Houweling; Igor Oruetxebarria; Anton K Raap; C Peter Verrijzer
Journal:  Genes Dev       Date:  2005-03-15       Impact factor: 11.361

7.  Site-specific recombination determined by I-SceI, a mitochondrial group I intron-encoded endonuclease expressed in the yeast nucleus.

Authors:  A Plessis; A Perrin; J E Haber; B Dujon
Journal:  Genetics       Date:  1992-03       Impact factor: 4.562

8.  Histone H2AX phosphorylation is dispensable for the initial recognition of DNA breaks.

Authors:  Arkady Celeste; Oscar Fernandez-Capetillo; Michael J Kruhlak; Duane R Pilch; David W Staudt; Alicia Lee; Robert F Bonner; William M Bonner; André Nussenzweig
Journal:  Nat Cell Biol       Date:  2003-07       Impact factor: 28.824

9.  Yeast histone 2A serine 129 is essential for the efficient repair of checkpoint-blind DNA damage.

Authors:  Christophe Redon; Duane R Pilch; Emmy P Rogakou; Ann H Orr; Noel F Lowndes; William M Bonner
Journal:  EMBO Rep       Date:  2003-07       Impact factor: 8.807

10.  A mammalian chromatin remodeling complex with similarities to the yeast INO80 complex.

Authors:  Jingji Jin; Yong Cai; Tingting Yao; Aaron J Gottschalk; Laurence Florens; Selene K Swanson; José L Gutiérrez; Michael K Coleman; Jerry L Workman; Arcady Mushegian; Michael P Washburn; Ronald C Conaway; Joan Weliky Conaway
Journal:  J Biol Chem       Date:  2005-10-17       Impact factor: 5.157

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  14 in total

Review 1.  Mi-2/NuRD complex making inroads into DNA-damage response pathway.

Authors:  Da-Qiang Li; Rakesh Kumar
Journal:  Cell Cycle       Date:  2010-06-01       Impact factor: 4.534

Review 2.  The role of DNA repair in chronic lymphocytic leukemia pathogenesis and chemotherapy resistance.

Authors:  Deepa Sampath; William Plunkett
Journal:  Curr Oncol Rep       Date:  2007-09       Impact factor: 5.075

3.  RSC facilitates Rad59-dependent homologous recombination between sister chromatids by promoting cohesin loading at DNA double-strand breaks.

Authors:  Ji-Hyun Oum; Changhyun Seong; Youngho Kwon; Jae-Hoon Ji; Amy Sid; Sreejith Ramakrishnan; Grzegorz Ira; Anna Malkova; Patrick Sung; Sang Eun Lee; Eun Yong Shim
Journal:  Mol Cell Biol       Date:  2011-08-01       Impact factor: 4.272

4.  Site-specific acetylation mark on an essential chromatin-remodeling complex promotes resistance to replication stress.

Authors:  Georgette M Charles; Changbin Chen; Susan C Shih; Sean R Collins; Pedro Beltrao; Xin Zhang; Tanu Sharma; Song Tan; Alma L Burlingame; Nevan J Krogan; Hiten D Madhani; Geeta J Narlikar
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-14       Impact factor: 11.205

Review 5.  Mechanisms of nanosilver-induced toxicological effects: more attention should be paid to its sublethal effects.

Authors:  Zhe Wang; Tian Xia; Sijin Liu
Journal:  Nanoscale       Date:  2015-05-07       Impact factor: 7.790

Review 6.  WSTF does it all: a multifunctional protein in transcription, repair, and replication.

Authors:  Chris Barnett; Jocelyn E Krebs
Journal:  Biochem Cell Biol       Date:  2011-02       Impact factor: 3.626

Review 7.  Chromatin dynamics during repair of chromosomal DNA double-strand breaks.

Authors:  Manisha Sinha; Craig L Peterson
Journal:  Epigenomics       Date:  2009-12       Impact factor: 4.778

Review 8.  DNA interstrand crosslink repair in mammalian cells.

Authors:  Kevin M McCabe; Susan B Olson; Robb E Moses
Journal:  J Cell Physiol       Date:  2009-09       Impact factor: 6.384

9.  The Set3 Complex Antagonizes the MYST Acetyltransferase Esa1 in the DNA Damage Response.

Authors:  Ana Lilia Torres-Machorro; Lauren G Clark; Christie S Chang; Lorraine Pillus
Journal:  Mol Cell Biol       Date:  2015-08-24       Impact factor: 4.272

10.  Histone H3 tail acetylation modulates ATP-dependent remodeling through multiple mechanisms.

Authors:  Nilanjana Chatterjee; Divya Sinha; Mekonnen Lemma-Dechassa; Song Tan; Michael A Shogren-Knaak; Blaine Bartholomew
Journal:  Nucleic Acids Res       Date:  2011-07-11       Impact factor: 16.971

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