Literature DB >> 17119871

SIRE-1, a putative plant retrovirus is closely related to a legume TY1-copia retrotransposon family.

Stephen R Pearce1.   

Abstract

SIRE-1 is a potential soybean retrovirus which has a gene order similar to Ty1-copia retrotransposons but also contains an envelope-like open reading frame (ORF), which is characteristic of retroviruses. PCR and Southern analysis reveals that SIRE-1 is closely related to a legume-wide family of envelope-lacking Ty1-copia group retrotransposons which suggests that SIRE-1 was formed by the recent acquisition of an envelope gene by a Ty1-copia retrotransposon.

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Year:  2006        PMID： 17119871      PMCID： PMC6275864          DOI： 10.2478/s11658-006-0053-z

Source DB:  PubMed          Journal:  Cell Mol Biol Lett        ISSN： 1425-8153            Impact factor:   5.787


  7 in total

1.  Sequence heterogeneity of the envelope-like domain in cultivated allotetraploid Gossypium species and their diploid progenitors.

Authors:  E E Hafez; A A Abdel Ghany; A H Paterson; E A Zaki
Journal:  J Appl Genet       Date:  2009       Impact factor: 3.240

2.  Envelope-like retrotransposons in the plant kingdom: evidence of their presence in gymnosperms (Pinus pinaster).

Authors:  Célia Miguel; Marta Simões; Maria Margarida Oliveira; Margarida Rocheta
Journal:  J Mol Evol       Date:  2008-10-17       Impact factor: 2.395

3.  The Ty1-copia families SALIRE and Cotzilla populating the Beta vulgaris genome show remarkable differences in abundance, chromosomal distribution, and age.

Authors:  Beatrice Weber; Torsten Wenke; Ulrike Frömmel; Thomas Schmidt; Tony Heitkam
Journal:  Chromosome Res       Date:  2009-12-29       Impact factor: 5.239

4.  Presence of env-like sequences in Quercus suber retrotransposons.

Authors:  M Carvalho; T Ribeiro; W Viegas; L Morais-Cecilio; M Rocheta
Journal:  J Appl Genet       Date:  2010       Impact factor: 2.653

5.  Obtaining retrotransposon sequences, analysis of their genomic distribution and use of retrotransposon-derived genetic markers in lentil (Lens culinaris Medik.).

Authors:  Rita Rey-Baños; Luis E Sáenz de Miera; Pedro García; Marcelino Pérez de la Vega
Journal:  PLoS One       Date:  2017-04-27       Impact factor: 3.240

Review 6.  Mechanisms of LTR-Retroelement Transposition: Lessons from Drosophila melanogaster.

Authors:  Lidia Nefedova; Alexander Kim
Journal:  Viruses       Date:  2017-04-16       Impact factor: 5.048

7.  Characterization of a heat-activated retrotransposon in Vigna angularis.

Authors:  Yukari Masuta; Akira Kawabe; Kosuke Nozawa; Ken Naito; Atsushi Kato; Hidetaka Ito
Journal:  Breed Sci       Date:  2018-03-24       Impact factor: 2.086
  7 in total

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