Literature DB >> 1711894

Hydrogen bonding monitored by deuterium isotope effects on carbonyl 13C chemical shift in BPTI: intra-residue hydrogen bonds in antiparallel beta-sheet.

E Tüchsen1, P E Hansen.   

Abstract

Deuterium isotope effects on carbonyl 13C magnetic shielding were measured for the backbone carbonyl groups in BPTI (basic pancreatic trypsin inhibitor), and interpreted as a measure of hydrogen bond energies. The effects originate from peptide amide proton deuterium substitution and were observed on carbonyl carbons separated by two or three covalent bonds from the amide H/D. Two-bond isotope effects depend on the energy of the hydrogen bond donated by NH/D. Calibration of the effect with model compound data leads to hydrogen bond enthalpies less than 4.7 kcal/mol. Isotope effects over three bonds from the amide H/D to the carbonyl carbon of the same amino acid residue are observed for seven carbonyl resonances in BPTI. The three-bond isotope effects are highly related to the various backbone conformations. The largest effects are observed for residues with an approximate syn- periplanar conformation of the H-N-C alpha-C = O atoms, as realized for many residues in the BPTI antiparallel beta-sheet. The residues that show measurable three-bond effects have unusually short distances between H and O. The size of this effect decreases rapidly with increased O..H distance in the open five-membered ring. This observation suggests appreciable interactions in these rings.

Entities:  

Mesh:

Substances:

Year:  1991        PMID: 1711894     DOI: 10.1016/0141-8130(91)90002-c

Source DB:  PubMed          Journal:  Int J Biol Macromol        ISSN: 0141-8130            Impact factor:   6.953


  6 in total

1.  Editing of multidimensional NMR spectra of partially deuterated proteins. Measurement of amide deuterium isotope effects on the chemical shifts of protein backbone nuclei.

Authors:  A Meissner; J Briand; O W Sφrensen
Journal:  J Biomol NMR       Date:  1998-08       Impact factor: 2.835

2.  Accurate measurements of the effects of deuteration at backbone amide positions on the chemical shifts of ¹⁵N, ¹³Cα, ¹³Cβ, ¹³CO and ¹Hα nuclei in proteins.

Authors:  Daoning Zhang; Vitali Tugarinov
Journal:  J Biomol NMR       Date:  2013-04-24       Impact factor: 2.835

3.  Trans-hydrogen bond deuterium isotope effects of A:T base pairs in DNA.

Authors:  Ioannis Vakonakis; Andy C LiWang
Journal:  J Biomol NMR       Date:  2004-05       Impact factor: 2.835

4.  A NMR experiment for simultaneous correlations of valine and leucine/isoleucine methyls with carbonyl chemical shifts in proteins.

Authors:  Vitali Tugarinov; Vincenzo Venditti; G Marius Clore
Journal:  J Biomol NMR       Date:  2013-12-18       Impact factor: 2.835

5.  Hydrogen-bond detection, configuration assignment and rotamer correction of side-chain amides in large proteins by NMR spectroscopy through protium/deuterium isotope effects.

Authors:  Aizhuo Liu; Jifeng Wang; Zhenwei Lu; Lishan Yao; Yue Li; Honggao Yan
Journal:  Chembiochem       Date:  2008-11-24       Impact factor: 3.164

6.  Intramolecular Hydrogen Bonds in Normal and Sterically Compressed o-Hydroxy Aromatic Aldehydes. Isotope Effects on Chemical Shifts and Hydrogen Bond Strength.

Authors:  Poul Erik Hansen; Fadhil S Kamounah; Bahjat A Saeed; Mark J MacLachlan; Jens Spanget-Larsen
Journal:  Molecules       Date:  2019-12-11       Impact factor: 4.411

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.