Literature DB >> 17118627

DNA microarray for detection of antibiotic resistance determinants in Bacillus anthracis and closely related Bacillus cereus.

Markus H Antwerpen1, Michaela Schellhase, Eva Ehrentreich-Förster, Frank Bier, Wolfgang Witte, Ulrich Nübel.   

Abstract

We developed a multiplex PCR for amplification of ten genes involved in resistance to ciprofloxacin, doxycycline, rifampin, and vancomycin in Bacillus anthracis and closely related Bacillus cereus. Enzymatic labelling of PCR products followed by hybridization to oligonucleotide probes on a DNA microarray enabled simultaneous detection of resistance genes tetK, tetL, tetM, tetO, vanA, and vanB and resistance-mediating point mutations in genes gyrA, gyrB, parC, and rpoB. The presented assay allows detection of clinically relevant antibiotic resistance determinants within 4h and can be used as a time-saving tool supporting conventional culture-based diagnostics.

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Year:  2006        PMID: 17118627     DOI: 10.1016/j.mcp.2006.10.002

Source DB:  PubMed          Journal:  Mol Cell Probes        ISSN: 0890-8508            Impact factor:   2.365


  11 in total

1.  In situ-synthesized virulence and marker gene biochip for detection of bacterial pathogens in water.

Authors:  Sarah M Miller; Dieter M Tourlousse; Robert D Stedtfeld; Samuel W Baushke; Amanda B Herzog; Lukas M Wick; Jean Marie Rouillard; Erdogan Gulari; James M Tiedje; Syed A Hashsham
Journal:  Appl Environ Microbiol       Date:  2008-02-01       Impact factor: 4.792

2.  Preparation and application of microarrays for the detection of antibiotic resistance genes in samples isolated from Changchun, China.

Authors:  Hao Lu; Xinglong Wang; Xulong Lang; Yingchao Wang; Yuan Dang; Fuxian Zhang; Jie Tang; Xiaoyan Li; Xin Feng
Journal:  Mol Biol Rep       Date:  2009-07-30       Impact factor: 2.316

3.  A rapid antimicrobial susceptibility test for Bacillus anthracis.

Authors:  Linda M Weigel; David Sue; Pierre A Michel; Brandon Kitchel; Segaran P Pillai
Journal:  Antimicrob Agents Chemother       Date:  2010-05-03       Impact factor: 5.191

4.  Bacillus manliponensis sp. nov., a new member of the Bacillus cereus group isolated from foreshore tidal flat sediment.

Authors:  Min Young Jung; Joong-Su Kim; Woon Kee Paek; Jeongheui Lim; Hansoo Lee; Pyoung Il Kim; Jin Yeul Ma; Wonyong Kim; Young-Hyo Chang
Journal:  J Microbiol       Date:  2011-12-28       Impact factor: 3.422

5.  Biochemical and structural analysis of an Eis family aminoglycoside acetyltransferase from bacillus anthracis.

Authors:  Keith D Green; Tapan Biswas; Changsoo Chang; Ruiying Wu; Wenjing Chen; Brian K Janes; Dominika Chalupska; Piotr Gornicki; Philip C Hanna; Oleg V Tsodikov; Andrzej Joachimiak; Sylvie Garneau-Tsodikova
Journal:  Biochemistry       Date:  2015-05-12       Impact factor: 3.162

6.  Optical Screening for Rapid Antimicrobial Susceptibility Testing and for Observation of Phenotypic Diversity among Strains of the Genetically Clonal Species Bacillus anthracis.

Authors:  Heather P McLaughlin; Amy S Gargis; Pierre Michel; David Sue; Linda M Weigel
Journal:  J Clin Microbiol       Date:  2017-01-04       Impact factor: 5.948

7.  Multiplex PCR and oligonucleotide microarray for detection of single-nucleotide polymorphisms associated with Plasmodium falciparum drug resistance.

Authors:  Guo Qing Zhang; Ya Yi Guan; Hai Hui Sheng; Bin Zheng; Song Wu; Hua Sheng Xiao; Lin Hua Tang
Journal:  J Clin Microbiol       Date:  2008-04-30       Impact factor: 5.948

8.  Multiplexed genotyping of methicillin-resistant Staphylococcus aureus isolates by use of padlock probes and tag microarrays.

Authors:  Kevin Kurt; Anders Alderborn; Mats Nilsson; Birgit Strommenger; Wolfgang Witte; Ulrich Nübel
Journal:  J Clin Microbiol       Date:  2009-01-21       Impact factor: 5.948

9.  Microbial Diagnostic Array Workstation (MDAW): a web server for diagnostic array data storage, sharing and analysis.

Authors:  Joy Scaria; Aswathy Sreedharan; Yung-Fu Chang
Journal:  Source Code Biol Med       Date:  2008-09-23

10.  Thirty-minute screening of antibiotic resistance genes in bacterial isolates with minimal sample preparation in static self-dispensing 64 and 384 assay cards.

Authors:  Tanja Kostić; Michael Ellis; Maggie R Williams; Tiffany M Stedtfeld; John B Kaneene; Robert D Stedtfeld; Syed A Hashsham
Journal:  Appl Microbiol Biotechnol       Date:  2015-07-31       Impact factor: 4.813

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