Literature DB >> 17113856

Characterization of specific donor binding to alpha1,4-N-acetylhexosaminyltransferase EXTL2 using isothermal titration calorimetry.

Mack Sobhany1, Masahiko Negishi.   

Abstract

Glycosyltransferases encompass one of the largest families of enzymes found in nature. Their principle function is to catalyze the transfer of activated donor-sugar molecules to various acceptor substrates. The molecular basis that governs this specific transfer reaction, such as how a given transferase determines donor-sugar specificity, remains to be elucidated. Human alpha1,4-N-acetylhexosaminyltransferase (EXTL2) transfers N-acetylglucosamine and N-acetylgalactosamine but does not transfer glucose or galactose. Isothermal titration calorimetry (ITC) is a powerful technique used to characterize various binding reactions, including both protein-ligand and protein-protein interactions. ITC provides the binding stoichiometry, affinity, and the thermodynamic parameters free energy (DeltaG), enthalpy (DeltaH), and entropy (DeltaS) of these binding interactions. This chapter describes our ITC study demonstrating the two-step mechanism that regulates the specific binding of N-acetylhexosamines to EXTL2.

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Year:  2006        PMID: 17113856      PMCID: PMC1773009          DOI: 10.1016/S0076-6879(06)16001-2

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  11 in total

1.  Isothermal titration calorimetry of protein-protein interactions.

Authors:  M M Pierce; C S Raman; B T Nall
Journal:  Methods       Date:  1999-10       Impact factor: 3.608

2.  Thermodynamics of the binding of Thermus aquaticus DNA polymerase to primed-template DNA.

Authors:  Kausiki Datta; Vince J LiCata
Journal:  Nucleic Acids Res       Date:  2003-10-01       Impact factor: 16.971

3.  The ribosome as an entropy trap.

Authors:  Annette Sievers; Malte Beringer; Marina V Rodnina; Richard Wolfenden
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-12       Impact factor: 11.205

Review 4.  Thermodynamics of protein-ligand interactions: history, presence, and future aspects.

Authors:  Remo Perozzo; Gerd Folkers; Leonardo Scapozza
Journal:  J Recept Signal Transduct Res       Date:  2004-02       Impact factor: 2.092

Review 5.  Characterization of protein-protein interactions by isothermal titration calorimetry.

Authors:  Adrian Velazquez-Campoy; Stephanie A Leavitt; Ernesto Freire
Journal:  Methods Mol Biol       Date:  2004

6.  ITC in the post-genomic era...? Priceless.

Authors:  Adrián Velázquez Campoy; Ernesto Freire
Journal:  Biophys Chem       Date:  2004-12-25       Impact factor: 2.352

7.  Structural basis of ordered binding of donor and acceptor substrates to the retaining glycosyltransferase, alpha-1,3-galactosyltransferase.

Authors:  Ester Boix; Yingnan Zhang; G Jawahar Swaminathan; Keith Brew; K Ravi Acharya
Journal:  J Biol Chem       Date:  2002-05-14       Impact factor: 5.157

8.  The tumor suppressor EXT-like gene EXTL2 encodes an alpha1, 4-N-acetylhexosaminyltransferase that transfers N-acetylgalactosamine and N-acetylglucosamine to the common glycosaminoglycan-protein linkage region. The key enzyme for the chain initiation of heparan sulfate.

Authors:  H Kitagawa; H Shimakawa; K Sugahara
Journal:  J Biol Chem       Date:  1999-05-14       Impact factor: 5.157

9.  Crystal structure of an alpha 1,4-N-acetylhexosaminyltransferase (EXTL2), a member of the exostosin gene family involved in heparan sulfate biosynthesis.

Authors:  Lars C Pedersen; Jian Dong; Fumiyasu Taniguchi; Hiroshi Kitagawa; Joe M Krahn; Lee G Pedersen; Kazuyuki Sugahara; Masahiko Negishi
Journal:  J Biol Chem       Date:  2003-01-31       Impact factor: 5.157

Review 10.  Glucosaminylglycan biosynthesis: what we can learn from the X-ray crystal structures of glycosyltransferases GlcAT1 and EXTL2.

Authors:  Masahiko Negishi; Jian Dong; Thomas A Darden; Lee G Pedersen; Lars C Pedersen
Journal:  Biochem Biophys Res Commun       Date:  2003-04-04       Impact factor: 3.575

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  1 in total

1.  Crystal structure of a virus-encoded putative glycosyltransferase.

Authors:  Ye Xiang; Ulrich Baxa; Ying Zhang; Alasdair C Steven; Gentry L Lewis; James L Van Etten; Michael G Rossmann
Journal:  J Virol       Date:  2010-09-22       Impact factor: 5.103

  1 in total

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