Literature DB >> 17103163

A multifunctional hybrid glycosyl hydrolase discovered in an uncultured microbial consortium from ruminant gut.

Nisha Palackal1, Christopher S Lyon, Seema Zaidi, Peter Luginbühl, Paul Dupree, Florence Goubet, John L Macomber, Jay M Short, Geoffrey P Hazlewood, Dan E Robertson, Brian A Steer.   

Abstract

A unique multifunctional glycosyl hydrolase was discovered by screening an environmental DNA library prepared from a microbial consortium collected from cow rumen. The protein consists of two adjacent catalytic domains. Sequence analysis predicted that one domain conforms to glycosyl hydrolase family 5 and the other to family 26. The enzyme is active on several different beta-linked substrates and possesses mannanase, xylanase, and glucanase activities. Site-directed mutagenesis studies on the catalytic residues confirmed the presence of two functionally independent catalytic domains. Using site-specific mutations, it was shown that one catalytic site hydrolyzes beta-1,4-linked mannan substrates, while the second catalytic site hydrolyzes beta-1,4-linked xylan and beta-1,4-linked glucan substrates. Polysaccharide Analysis using Carbohydrate gel Electrophoresis (PACE) also confirmed that the enzyme has discrete domains for binding and hydrolysis of glucan- and mannan-linked polysaccharides. Such multifunctional enzymes have many potential industrial applications in plant processing, including biomass saccharification, animal feed nutritional enhancement, textile, and pulp and paper processing.

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Year:  2006        PMID: 17103163     DOI: 10.1007/s00253-006-0645-6

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  13 in total

1.  Novel glycoside hydrolases identified by screening a Chinese Holstein dairy cow rumen-derived metagenome library.

Authors:  Shengguo Zhao; Jiaqi Wang; Dengpan Bu; Kailang Liu; Yaxin Zhu; Zhiyang Dong; Zhongtang Yu
Journal:  Appl Environ Microbiol       Date:  2010-08-13       Impact factor: 4.792

2.  Size Does Matter: Application-driven Approaches for Soil Metagenomics.

Authors:  Kavita S Kakirde; Larissa C Parsley; Mark R Liles
Journal:  Soil Biol Biochem       Date:  2010-11-01       Impact factor: 7.609

3.  Molecular cloning, heterologous expression, and functional characterization of a cellulolytic enzyme (Cel PRII) from buffalo rumen metagenome.

Authors:  Ravi K Shah; Amrutlal K Patel; Deepti M Davla; Ishan K Parikh; Ramalingam B Subramanian; Kamlesh C Patel; Subhash J Jakhesara; Chaitanya G Joshi
Journal:  3 Biotech       Date:  2017-07-21       Impact factor: 2.406

4.  Metagenomics in animal gastrointestinal ecosystem: a microbiological and biotechnological perspective.

Authors:  B Singh; T K Bhat; N P Kurade; O P Sharma
Journal:  Indian J Microbiol       Date:  2008-06-17       Impact factor: 2.461

5.  Activity-based metagenomic screening and biochemical characterization of bovine ruminal protozoan glycoside hydrolases.

Authors:  Seth D Findley; Melanie R Mormile; Andrea Sommer-Hurley; Xue-Cheng Zhang; Peter Tipton; Krista Arnett; James H Porter; Monty Kerley; Gary Stacey
Journal:  Appl Environ Microbiol       Date:  2011-09-23       Impact factor: 4.792

6.  Design of chimeric levansucrases with improved transglycosylation activity.

Authors:  Clarita Olvera; Sara Centeno-Leija; Paulina Ruiz-Leyva; Agustín López-Munguía
Journal:  Appl Environ Microbiol       Date:  2012-01-13       Impact factor: 4.792

Review 7.  Function, distribution, and annotation of characterized cellulases, xylanases, and chitinases from CAZy.

Authors:  Stanley T C Nguyen; Hannah L Freund; Joshua Kasanjian; Renaud Berlemont
Journal:  Appl Microbiol Biotechnol       Date:  2018-01-22       Impact factor: 4.813

8.  Functional analyses of multiple lichenin-degrading enzymes from the rumen bacterium Ruminococcus albus 8.

Authors:  Michael Iakiviak; Roderick I Mackie; Isaac K O Cann
Journal:  Appl Environ Microbiol       Date:  2011-09-02       Impact factor: 4.792

9.  A nanostructure-initiator mass spectrometry-based enzyme activity assay.

Authors:  Trent R Northen; Jinq-Chyi Lee; Linh Hoang; Jason Raymond; Der-Ren Hwang; Steven M Yannone; Chi-Huey Wong; Gary Siuzdak
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-04       Impact factor: 11.205

10.  Structure-Function Analysis of a Mixed-linkage β-Glucanase/Xyloglucanase from the Key Ruminal Bacteroidetes Prevotella bryantii B(1)4.

Authors:  Nicholas McGregor; Mariya Morar; Thomas Hauch Fenger; Peter Stogios; Nicolas Lenfant; Victor Yin; Xiaohui Xu; Elena Evdokimova; Hong Cui; Bernard Henrissat; Alexei Savchenko; Harry Brumer
Journal:  J Biol Chem       Date:  2015-10-27       Impact factor: 5.157

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