Literature DB >> 17093465

ArrayExpress service for reviewers/editors of DNA microarray papers.

Alvis Brazma, Helen Parkinson.   

Abstract

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Year:  2006        PMID: 17093465     DOI: 10.1038/nbt1106-1321

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


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  11 in total

1.  Repeatability of published microarray gene expression analyses.

Authors:  John P A Ioannidis; David B Allison; Catherine A Ball; Issa Coulibaly; Xiangqin Cui; Aedín C Culhane; Mario Falchi; Cesare Furlanello; Laurence Game; Giuseppe Jurman; Jon Mangion; Tapan Mehta; Michael Nitzberg; Grier P Page; Enrico Petretto; Vera van Noort
Journal:  Nat Genet       Date:  2008-01-28       Impact factor: 38.330

2.  Co-expression of neighboring genes in the zebrafish (Danio rerio) genome.

Authors:  Huai-Kuang Tsai; Pei-Ying Huang; Cheng-Yan Kao; Daryi Wang
Journal:  Int J Mol Sci       Date:  2009-08-21       Impact factor: 6.208

Review 3.  Data standards for Omics data: the basis of data sharing and reuse.

Authors:  Stephen A Chervitz; Eric W Deutsch; Dawn Field; Helen Parkinson; John Quackenbush; Phillipe Rocca-Serra; Susanna-Assunta Sansone; Christian J Stoeckert; Chris F Taylor; Ronald Taylor; Catherine A Ball
Journal:  Methods Mol Biol       Date:  2011

4.  Effect of chemical mutagens and carcinogens on gene expression profiles in human TK6 cells.

Authors:  Lode Godderis; Reuben Thomas; Alan E Hubbard; Ali M Tabish; Peter Hoet; Luoping Zhang; Martyn T Smith; Hendrik Veulemans; Cliona M McHale
Journal:  PLoS One       Date:  2012-06-18       Impact factor: 3.240

5.  ArrayExpress--a public database of microarray experiments and gene expression profiles.

Authors:  H Parkinson; M Kapushesky; M Shojatalab; N Abeygunawardena; R Coulson; A Farne; E Holloway; N Kolesnykov; P Lilja; M Lukk; R Mani; T Rayner; A Sharma; E William; U Sarkans; A Brazma
Journal:  Nucleic Acids Res       Date:  2006-11-28       Impact factor: 16.971

6.  UCbase & miRfunc: a database of ultraconserved sequences and microRNA function.

Authors:  Cristian Taccioli; Enrica Fabbri; Rosa Visone; Stefano Volinia; George A Calin; Louise Y Fong; Roberto Gambari; Arianna Bottoni; Mario Acunzo; John Hagan; Marilena V Iorio; Claudia Piovan; Giulia Romano; Carlo Maria Croce
Journal:  Nucleic Acids Res       Date:  2008-10-22       Impact factor: 16.971

7.  Gene expression atlas at the European bioinformatics institute.

Authors:  Misha Kapushesky; Ibrahim Emam; Ele Holloway; Pavel Kurnosov; Andrey Zorin; James Malone; Gabriella Rustici; Eleanor Williams; Helen Parkinson; Alvis Brazma
Journal:  Nucleic Acids Res       Date:  2009-11-11       Impact factor: 16.971

8.  MIMAS 3.0 is a Multiomics Information Management and Annotation System.

Authors:  Alexandre Gattiker; Leandro Hermida; Robin Liechti; Ioannis Xenarios; Olivier Collin; Jacques Rougemont; Michael Primig
Journal:  BMC Bioinformatics       Date:  2009-05-18       Impact factor: 3.169

9.  ArrayExpress update--from an archive of functional genomics experiments to the atlas of gene expression.

Authors:  Helen Parkinson; Misha Kapushesky; Nikolay Kolesnikov; Gabriella Rustici; Mohammad Shojatalab; Niran Abeygunawardena; Hugo Berube; Miroslaw Dylag; Ibrahim Emam; Anna Farne; Ele Holloway; Margus Lukk; James Malone; Roby Mani; Ekaterina Pilicheva; Tim F Rayner; Faisal Rezwan; Anjan Sharma; Eleanor Williams; Xiangqun Zheng Bradley; Tomasz Adamusiak; Marco Brandizi; Tony Burdett; Richard Coulson; Maria Krestyaninova; Pavel Kurnosov; Eamonn Maguire; Sudeshna Guha Neogi; Philippe Rocca-Serra; Susanna-Assunta Sansone; Nataliya Sklyar; Mengyao Zhao; Ugis Sarkans; Alvis Brazma
Journal:  Nucleic Acids Res       Date:  2008-11-10       Impact factor: 16.971

10.  RDML: structured language and reporting guidelines for real-time quantitative PCR data.

Authors:  Steve Lefever; Jan Hellemans; Filip Pattyn; Daniel R Przybylski; Chris Taylor; René Geurts; Andreas Untergasser; Jo Vandesompele
Journal:  Nucleic Acids Res       Date:  2009-02-17       Impact factor: 16.971

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