Literature DB >> 17088630

Invariom-model refinement of L-valinol.

Birger Dittrich1, Parthapratim Munshi, Mark A Spackman.   

Abstract

The structure of L-valinol [(S)-(+)-2-amino-3-methylbutan-1-ol or hydroxylated L-valine], C5H13NO, has been determined at 100 K by single-crystal X-ray diffraction. The independent atom model geometry, Flack parameter and figures of merit are compared with results from an invariom structure refinement. The latter provides H-atom positions free of independent atom model bias and therefore yields a more accurate hydrogen-bond pattern, and the geometry from invariom refinement shows an improved agreement with results from a quantum chemical geometry optimization.

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Year:  2006        PMID: 17088630     DOI: 10.1107/S0108270106037358

Source DB:  PubMed          Journal:  Acta Crystallogr C        ISSN: 0108-2701            Impact factor:   1.172


  3 in total

1.  DiSCaMB: a software library for aspherical atom model X-ray scattering factor calculations with CPUs and GPUs.

Authors:  Michał L Chodkiewicz; Szymon Migacz; Witold Rudnicki; Anna Makal; Jarosław A Kalinowski; Nigel W Moriarty; Ralf W Grosse-Kunstleve; Pavel V Afonine; Paul D Adams; Paulina Maria Dominiak
Journal:  J Appl Crystallogr       Date:  2018-02-01       Impact factor: 3.304

2.  Yes, one can obtain better quality structures from routine X-ray data collection.

Authors:  W Fabiola Sanjuan-Szklarz; Anna A Hoser; Matthias Gutmann; Anders Østergaard Madsen; Krzysztof Woźniak
Journal:  IUCrJ       Date:  2016-01-01       Impact factor: 4.769

3.  Using invariom modelling to distinguish correct and incorrect central atoms in `duplicate structures' with neighbouring 3d elements.

Authors:  Claudia M Wandtke; Matthias Weil; Jim Simpson; Birger Dittrich
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2017-09-29
  3 in total

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