Literature DB >> 17086368

Random partition models and exchangeability for Bayesian identification of population structure.

Jukka Corander1, Mats Gyllenberg, Timo Koski.   

Abstract

We introduce a Bayesian theoretical formulation of the statistical learning problem concerning the genetic structure of populations. The two key concepts in our derivation are exchangeability in its various forms and random allocation models. Implications of our results to empirical investigation of the population structure are discussed.

Mesh：

Year:  2006        PMID： 17086368     DOI： 10.1007/s11538-006-9161-1

Source DB:  PubMed          Journal:  Bull Math Biol        ISSN： 0092-8240            Impact factor:   1.758


  8 in total

1.  Genetic diversity and population structure of pea (Pisum sativum L.) varieties derived from combined retrotransposon, microsatellite and morphological marker analysis.

Authors:  Petr Smýkal; Miroslav Hýbl; Jukka Corander; Jirí Jarkovský; Andrew J Flavell; Miroslav Griga
Journal:  Theor Appl Genet       Date:  2008-05-27       Impact factor: 5.699

2.  Bayesian clustering and feature selection for cancer tissue samples.

Authors:  Pekka Marttinen; Samuel Myllykangas; Jukka Corander
Journal:  BMC Bioinformatics       Date:  2009-03-18       Impact factor: 3.169

3.  Identifying currents in the gene pool for bacterial populations using an integrative approach.

Authors:  Jing Tang; William P Hanage; Christophe Fraser; Jukka Corander
Journal:  PLoS Comput Biol       Date:  2009-08-07       Impact factor: 4.475

4.  Extensive contemporary pollen-mediated gene flow in two herb species, Ranunculus bulbosus and Trifolium montanum, along an altitudinal gradient in a meadow landscape.

Authors:  Philippe Matter; Chris J Kettle; Jaboury Ghazoul; Andrea R Pluess
Journal:  Ann Bot       Date:  2013-02-12       Impact factor: 4.357

5.  Exploring demographic, physical, and historical explanations for the genetic structure of two lineages of Greater Antillean bats.

Authors:  Robert A Muscarella; Kevin L Murray; Derek Ortt; Amy L Russell; Theodore H Fleming
Journal:  PLoS One       Date:  2011-03-21       Impact factor: 3.240

6.  Epidemiological tracking and population assignment of the non-clonal bacterium, Burkholderia pseudomallei.

Authors:  Julia Dale; Erin P Price; Heidie Hornstra; Joseph D Busch; Mark Mayo; Daniel Godoy; Vanaporn Wuthiekanun; Anthony Baker; Jeffrey T Foster; David M Wagner; Apichai Tuanyok; Jeffrey Warner; Brian G Spratt; Sharon J Peacock; Bart J Currie; Paul Keim; Talima Pearson
Journal:  PLoS Negl Trop Dis       Date:  2011-12-13

7.  Enhanced Bayesian modelling in BAPS software for learning genetic structures of populations.

Authors:  Jukka Corander; Pekka Marttinen; Jukka Sirén; Jing Tang
Journal:  BMC Bioinformatics       Date:  2008-12-16       Impact factor: 3.169

8.  Combined Analyses of Chloroplast DNA Haplotypes and Microsatellite Markers Reveal New Insights Into the Origin and Dissemination Route of Cultivated Pears Native to East Asia.

Authors:  Xiaoyan Yue; Xiaoyan Zheng; Yu Zong; Shuang Jiang; Chunyun Hu; Peiyuan Yu; Guoqin Liu; Yufen Cao; Hongju Hu; Yuanwen Teng
Journal:  Front Plant Sci       Date:  2018-05-07       Impact factor: 5.753
  8 in total

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