Literature DB >> 17085562

Evolutionary genomics of lactic acid bacteria.

Kira S Makarova1, Eugene V Koonin.   

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Year:  2006        PMID： 17085562      PMCID： PMC1797341          DOI： 10.1128/JB.01351-06

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


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  58 in total

Review 1.  Exploration of antimicrobial potential in LAB by genomics.

Authors:  Ingolf F Nes; Ola Johnsborg
Journal:  Curr Opin Biotechnol       Date:  2004-04       Impact factor: 9.740

2.  The complete genome sequence of the meat-borne lactic acid bacterium Lactobacillus sakei 23K.

Authors:  Stéphane Chaillou; Marie-Christine Champomier-Vergès; Monique Cornet; Anne-Marie Crutz-Le Coq; Anne-Marie Dudez; Véronique Martin; Sophie Beaufils; Emmanuelle Darbon-Rongère; Robert Bossy; Valentin Loux; Monique Zagorec
Journal:  Nat Biotechnol       Date:  2005-11-06       Impact factor: 54.908

Review 3.  Diversity, vitality and activities of intestinal lactic acid bacteria and bifidobacteria assessed by molecular approaches.

Authors:  Elaine E Vaughan; Hans G H J Heilig; Kaouther Ben-Amor; Willem M de Vos
Journal:  FEMS Microbiol Rev       Date:  2005-08       Impact factor: 16.408

4.  Complete sequences of four plasmids of Lactococcus lactis subsp. cremoris SK11 reveal extensive adaptation to the dairy environment.

Authors:  Roland J Siezen; Bernadet Renckens; Iris van Swam; Sander Peters; Richard van Kranenburg; Michiel Kleerebezem; Willem M de Vos
Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

5.  The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract.

Authors:  Mark A Schell; Maria Karmirantzou; Berend Snel; David Vilanova; Bernard Berger; Gabriella Pessi; Marie-Camille Zwahlen; Frank Desiere; Peer Bork; Michele Delley; R David Pridmore; Fabrizio Arigoni
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-15       Impact factor: 11.205

Review 6.  New insights in the molecular biology and physiology of Streptococcus thermophilus revealed by comparative genomics.

Authors:  Pascal Hols; Frédéric Hancy; Laetitia Fontaine; Benoît Grossiord; Deborah Prozzi; Nathalie Leblond-Bourget; Bernard Decaris; Alexander Bolotin; Christine Delorme; S Dusko Ehrlich; Eric Guédon; Véronique Monnet; Pierre Renault; Michiel Kleerebezem
Journal:  FEMS Microbiol Rev       Date:  2005-08       Impact factor: 16.408

Review 7.  Genome data mining of lactic acid bacteria: the impact of bioinformatics.

Authors:  Roland J Siezen; Frank H J van Enckevort; Michiel Kleerebezem; Bas Teusink
Journal:  Curr Opin Biotechnol       Date:  2004-04       Impact factor: 9.740

8.  The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533.

Authors:  R David Pridmore; Bernard Berger; Frank Desiere; David Vilanova; Caroline Barretto; Anne-Cecile Pittet; Marie-Camille Zwahlen; Martine Rouvet; Eric Altermann; Rodolphe Barrangou; Beat Mollet; Annick Mercenier; Todd Klaenhammer; Fabrizio Arigoni; Mark A Schell
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-24       Impact factor: 11.205

9.  BAGEL: a web-based bacteriocin genome mining tool.

Authors:  Anne de Jong; Sacha A F T van Hijum; Jetta J E Bijlsma; Jan Kok; Oscar P Kuipers
Journal:  Nucleic Acids Res       Date:  2006-07-01       Impact factor: 16.971

10.  Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes.

Authors:  Boris G Mirkin; Trevor I Fenner; Michael Y Galperin; Eugene V Koonin
Journal:  BMC Evol Biol       Date:  2003-01-06       Impact factor: 3.260
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  76 in total

Review 1.  Probiogenomics as a tool to obtain genetic insights into adaptation of probiotic bacteria to the human gut.

Authors:  Marco Ventura; Francesca Turroni; Douwe van Sinderen
Journal:  Bioeng Bugs       Date:  2012-03-01

2.  Complete genome sequence of the dairy isolate Streptococcus macedonicus ACA-DC 198.

Authors:  Konstantinos Papadimitriou; Stéphanie Ferreira; Nikolaos C Papandreou; Eleni Mavrogonatou; Philip Supply; Bruno Pot; Effie Tsakalidou
Journal:  J Bacteriol       Date:  2012-04       Impact factor: 3.490

3.  Assessment of the diversity of dairy Lactococcus lactis subsp. lactis isolates by an integrated approach combining phenotypic, genomic, and transcriptomic analyses.

Authors:  Punthip Tan-a-ram; Tamara Cardoso; Marie-Line Daveran-Mingot; Sunthorn Kanchanatawee; Pascal Loubière; Laurence Girbal; Muriel Cocaign-Bousquet
Journal:  Appl Environ Microbiol       Date:  2010-12-03       Impact factor: 4.792

4.  Evolutionary history of the OmpR/IIIA family of signal transduction two component systems in Lactobacillaceae and Leuconostocaceae.

Authors:  Manuel Zúñiga; Ciara Luna Gómez-Escoín; Fernando González-Candelas
Journal:  BMC Evol Biol       Date:  2011-02-01       Impact factor: 3.260

Review 5.  Genome-scale analyses of health-promoting bacteria: probiogenomics.

Authors:  Marco Ventura; Sarah O'Flaherty; Marcus J Claesson; Francesca Turroni; Todd R Klaenhammer; Douwe van Sinderen; Paul W O'Toole
Journal:  Nat Rev Microbiol       Date:  2008-11-24       Impact factor: 60.633

6.  Metabolism of Fructophilic Lactic Acid Bacteria Isolated from the Apis mellifera L. Bee Gut: Phenolic Acids as External Electron Acceptors.

Authors:  Pasquale Filannino; Raffaella Di Cagno; Rocco Addante; Erica Pontonio; Marco Gobbetti
Journal:  Appl Environ Microbiol       Date:  2016-09-16       Impact factor: 4.792

7.  Biofilm Formation on Stainless Steel by Streptococcus thermophilus UC8547 in Milk Environments Is Mediated by the Proteinase PrtS.

Authors:  D Bassi; F Cappa; S Gazzola; L Orrù; P S Cocconcelli
Journal:  Appl Environ Microbiol       Date:  2017-03-31       Impact factor: 4.792

8.  Role of hypermutability in the evolution of the genus Oenococcus.

Authors:  Angela M Marcobal; David A Sela; Yuri I Wolf; Kira S Makarova; David A Mills
Journal:  J Bacteriol       Date:  2007-11-09       Impact factor: 3.490

Review 9.  The Enterococcus: a Model of Adaptability to Its Environment.

Authors:  Mónica García-Solache; Louis B Rice
Journal:  Clin Microbiol Rev       Date:  2019-01-30       Impact factor: 26.132

10.  Distribution and functions of phosphotransferase system genes in the genome of the lactic acid bacterium Oenococcus oeni.

Authors:  Zohra Jamal; Cécile Miot-Sertier; François Thibau; Lucie Dutilh; Aline Lonvaud-Funel; Patricia Ballestra; Claire Le Marrec; Marguerite Dols-Lafargue
Journal:  Appl Environ Microbiol       Date:  2013-03-22       Impact factor: 4.792
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