Literature DB >> 17084698

Differential regulation of germline mRNAs in soma and germ cells by zebrafish miR-430.

Yuichiro Mishima1, Antonio J Giraldez, Yasuaki Takeda, Toshinobu Fujiwara, Hiroshi Sakamoto, Alexander F Schier, Kunio Inoue.   

Abstract

Early in development, primordial germ cells (PGCs) are set aside from somatic cells and acquire a unique gene-expression program . The mechanisms underlying germline-specific gene expression are largely unknown. Nanos expression is required during germline development and is posttranscriptionally restricted to PGCs . Here we report that the microRNA miR-430 targets the 3' untranslated region (UTR) of nanos1 during zebrafish embryogenesis. A miR-430 target site within the nanos1 3' UTR reduces poly(A) tail length, mRNA stability, and translation. Repression is disrupted in maternal-zygotic dicer mutants (MZdicer), which lack mature miRNAs , and is restored by injection of processed miR-430. Although miR-430 represses other genes equally in germline and soma, specific regions in the nanos1 3' UTR compensate for microRNA-mediated repression in PGCs and allow germline-specific expression. We show that the 3' UTR of an additional PGC-specific gene, TDRD7, is also targeted by miR-430. These results indicate that miR-430 targets the 3' UTRs of germline genes and suggest that differential susceptibility to microRNAs contributes to tissue-specific gene expression.

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Year:  2006        PMID: 17084698      PMCID: PMC1764209          DOI: 10.1016/j.cub.2006.08.086

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  38 in total

Review 1.  Germ cells.

Authors:  C Wylie
Journal:  Curr Opin Genet Dev       Date:  2000-08       Impact factor: 5.578

2.  Substrate requirements for let-7 function in the developing zebrafish embryo.

Authors:  Wigard P Kloosterman; Erno Wienholds; René F Ketting; Ronald H A Plasterk
Journal:  Nucleic Acids Res       Date:  2004-12-07       Impact factor: 16.971

3.  Temporal complexity within a translational control element in the nanos mRNA.

Authors:  Kevin M Forrest; Ira E Clark; Roshan A Jain; Elizabeth R Gavis
Journal:  Development       Date:  2004-11-03       Impact factor: 6.868

4.  MicroRNAs regulate brain morphogenesis in zebrafish.

Authors:  Antonio J Giraldez; Ryan M Cinalli; Margaret E Glasner; Anton J Enright; J Michael Thomson; Scott Baskerville; Scott M Hammond; David P Bartel; Alexander F Schier
Journal:  Science       Date:  2005-03-17       Impact factor: 47.728

Review 5.  Mechanisms of translational control by the 3' UTR in development and differentiation.

Authors:  Cornelia H de Moor; Hedda Meijer; Sarah Lissenden
Journal:  Semin Cell Dev Biol       Date:  2005-01-12       Impact factor: 7.727

6.  Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs.

Authors:  Lee P Lim; Nelson C Lau; Philip Garrett-Engele; Andrew Grimson; Janell M Schelter; John Castle; David P Bartel; Peter S Linsley; Jason M Johnson
Journal:  Nature       Date:  2005-01-30       Impact factor: 49.962

7.  Smaug, a novel RNA-binding protein that operates a translational switch in Drosophila.

Authors:  A Dahanukar; J A Walker; R P Wharton
Journal:  Mol Cell       Date:  1999-08       Impact factor: 17.970

8.  Smaug, a novel and conserved protein, contributes to repression of nanos mRNA translation in vitro.

Authors:  C A Smibert; Y S Lie; W Shillinglaw; W J Henzel; P M Macdonald
Journal:  RNA       Date:  1999-12       Impact factor: 4.942

9.  nos-1 and nos-2, two genes related to Drosophila nanos, regulate primordial germ cell development and survival in Caenorhabditis elegans.

Authors:  K Subramaniam; G Seydoux
Journal:  Development       Date:  1999-11       Impact factor: 6.868

10.  Principles of microRNA-target recognition.

Authors:  Julius Brennecke; Alexander Stark; Robert B Russell; Stephen M Cohen
Journal:  PLoS Biol       Date:  2005-03       Impact factor: 8.029

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  122 in total

Review 1.  microRNAs, the cell's Nepenthe: clearing the past during the maternal-to-zygotic transition and cellular reprogramming.

Authors:  Antonio J Giraldez
Journal:  Curr Opin Genet Dev       Date:  2010-05-06       Impact factor: 5.578

2.  Translational inhibition by deadenylation-independent mechanisms is central to microRNA-mediated silencing in zebrafish.

Authors:  Yuichiro Mishima; Akira Fukao; Tomoyoshi Kishimoto; Hiroshi Sakamoto; Toshinobu Fujiwara; Kunio Inoue
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-09       Impact factor: 11.205

3.  Xenopus Nanos1 is required to prevent endoderm gene expression and apoptosis in primordial germ cells.

Authors:  Fangfang Lai; Amar Singh; Mary Lou King
Journal:  Development       Date:  2012-03-07       Impact factor: 6.868

Review 4.  MicroRNAs and their targets: recognition, regulation and an emerging reciprocal relationship.

Authors:  Amy E Pasquinelli
Journal:  Nat Rev Genet       Date:  2012-03-13       Impact factor: 53.242

Review 5.  The mechanics of miRNA-mediated gene silencing: a look under the hood of miRISC.

Authors:  Marc R Fabian; Nahum Sonenberg
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

6.  Elr-type proteins protect Xenopus Dead end mRNA from miR-18-mediated clearance in the soma.

Authors:  Katja Koebernick; Jana Loeber; Patrick Kobina Arthur; Katsiaryna Tarbashevich; Tomas Pieler
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-30       Impact factor: 11.205

Review 7.  The widespread regulation of microRNA biogenesis, function and decay.

Authors:  Jacek Krol; Inga Loedige; Witold Filipowicz
Journal:  Nat Rev Genet       Date:  2010-07-27       Impact factor: 53.242

Review 8.  Biological functions of microRNAs: a review.

Authors:  Yong Huang; Xing Jia Shen; Quan Zou; Sheng Peng Wang; Shun Ming Tang; Guo Zheng Zhang
Journal:  J Physiol Biochem       Date:  2010-10-28       Impact factor: 4.158

9.  The forkhead transcription factor FoxY regulates Nanos.

Authors:  Jia L Song; Gary M Wessel
Journal:  Mol Reprod Dev       Date:  2012-08-15       Impact factor: 2.609

10.  Conserved mechanisms for germ cell-specific localization of nanos3 transcripts in teleost species with aquaculture significance.

Authors:  Adrijana Škugor; Krasimir Slanchev; Jacob Seilø Torgersen; Helge Tveiten; Øivind Andersen
Journal:  Mar Biotechnol (NY)       Date:  2013-10-04       Impact factor: 3.619

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