Literature DB >> 1707307

Translational diffusion and intrinsic viscosity of globular proteins. Theoretical predictions using hydrated hydrodynamic models. Application to BPTI.

M M García1, M A Jiménez Rios, J M García Bernal.   

Abstract

In this paper, we present a way to make hydrodynamic models of globular proteins, including the hydration shell associated with them in aqueous solutions. Theoretical calculations using these models are made in order to determine the hydrodynamic properties of these proteins, employing rigorous and approximate methods of calculation. These will be applied to the bovine pancreatic trypsin inhibitor, BPTI. Several hydrodynamic models are constructed: the A-model for the unhydrated protein BPTI and a set of H-models for hydrated protein with different hydration degrees. Theoretical results for the translational diffusion coefficient Dt and the intrinsic viscosity [eta] are obtained from different models. From the analysis of the A-model and hydrodynamic properties, there is not a clear assignation of an ellipsoidal shape to this protein molecule. An amount of approximately 0.5 g H2O/g protein could be assigned to the BPTI.

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Year:  1990        PMID: 1707307     DOI: 10.1016/0141-8130(90)90077-n

Source DB:  PubMed          Journal:  Int J Biol Macromol        ISSN: 0141-8130            Impact factor:   6.953


  4 in total

1.  Calculation of hydrodynamic properties of globular proteins from their atomic-level structure.

Authors:  J García De La Torre; M L Huertas; B Carrasco
Journal:  Biophys J       Date:  2000-02       Impact factor: 4.033

2.  Conformation of a clathrin triskelion in solution.

Authors:  Matthew L Ferguson; Kondury Prasad; Dan L Sackett; Hacène Boukari; Eileen M Lafer; Ralph Nossal
Journal:  Biochemistry       Date:  2006-05-09       Impact factor: 3.162

3.  Clathrin triskelia show evidence of molecular flexibility.

Authors:  Matthew L Ferguson; Kondury Prasad; Hacene Boukari; Dan L Sackett; Susan Krueger; Eileen M Lafer; Ralph Nossal
Journal:  Biophys J       Date:  2008-05-23       Impact factor: 4.033

4.  Hydrodynamic properties of a double-helical model for DNA.

Authors:  J Garcia de la Torre; S Navarro; M C Lopez Martinez
Journal:  Biophys J       Date:  1994-05       Impact factor: 4.033

  4 in total

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