Literature DB >> 17070958

SR proteins: a foot on the exon before the transition from intron to exon definition.

Oren Ram1, Gil Ast.   

Abstract

Two recent publications illuminate the evolution of alternative splicing, showing that a SR (serine-arginine-rich) protein that regulates alternative splicing in multicellular organisms is also found in a unicellular organism without alternative splicing, in which it can assist in the splicing of weak introns. Moreover, insertion of SR proteins into an organism lacking such proteins can restore the splicing of weak introns. These results imply that SR proteins had already facilitated the splicing of weak introns before the evolution of alternative splicing.

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Year:  2006        PMID: 17070958     DOI: 10.1016/j.tig.2006.10.002

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  24 in total

1.  Changes in exon-intron structure during vertebrate evolution affect the splicing pattern of exons.

Authors:  Sahar Gelfman; David Burstein; Osnat Penn; Anna Savchenko; Maayan Amit; Schraga Schwartz; Tal Pupko; Gil Ast
Journal:  Genome Res       Date:  2011-10-05       Impact factor: 9.043

2.  Chromatin density and splicing destiny: on the cross-talk between chromatin structure and splicing.

Authors:  Schraga Schwartz; Gil Ast
Journal:  EMBO J       Date:  2010-04-20       Impact factor: 11.598

Review 3.  Alternative splicing and evolution: diversification, exon definition and function.

Authors:  Hadas Keren; Galit Lev-Maor; Gil Ast
Journal:  Nat Rev Genet       Date:  2010-04-08       Impact factor: 53.242

4.  Loss of exon identity is a common mechanism of human inherited disease.

Authors:  Timothy Sterne-Weiler; Jonathan Howard; Matthew Mort; David N Cooper; Jeremy R Sanford
Journal:  Genome Res       Date:  2011-07-12       Impact factor: 9.043

5.  Chromatin organization marks exon-intron structure.

Authors:  Schraga Schwartz; Eran Meshorer; Gil Ast
Journal:  Nat Struct Mol Biol       Date:  2009-09       Impact factor: 15.369

6.  SRSF1-Regulated Alternative Splicing in Breast Cancer.

Authors:  Olga Anczuków; Martin Akerman; Antoine Cléry; Jie Wu; Chen Shen; Nitin H Shirole; Amanda Raimer; Shuying Sun; Mads A Jensen; Yimin Hua; Frédéric H-T Allain; Adrian R Krainer
Journal:  Mol Cell       Date:  2015-10-01       Impact factor: 17.970

Review 7.  The power of fission: yeast as a tool for understanding complex splicing.

Authors:  Benjamin Jung Fair; Jeffrey A Pleiss
Journal:  Curr Genet       Date:  2016-09-14       Impact factor: 3.886

8.  The role of transposable elements in the evolution of non-mammalian vertebrates and invertebrates.

Authors:  Noa Sela; Eddo Kim; Gil Ast
Journal:  Genome Biol       Date:  2010-06-02       Impact factor: 13.583

9.  A DNA damage signal activates and derepresses exon inclusion in Drosophila TAF1 alternative splicing.

Authors:  Matthew S Marengo; David A Wassarman
Journal:  RNA       Date:  2008-07-02       Impact factor: 4.942

10.  Exon definition as a potential negative force against intron losses in evolution.

Authors:  Deng-Ke Niu
Journal:  Biol Direct       Date:  2008-11-13       Impact factor: 4.540

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