Literature DB >> 17070730

Quality control assessment for the PCR diagnosis of tick-borne encephalitis virus infections.

Oliver Donoso Mantke1, Stephan W Aberle, Tatjana Avsic-Zupanc, Milan Labuda, Matthias Niedrig.   

Abstract

BACKGROUND: Reverse transcriptase-polymerase chain reaction (RT-PCR) is an efficient method for the early detection of tick-borne encephalitis virus (TBEV) RNA in blood and serum samples taken prior to the appearance of antibodies. Improved diagnostics are critical for optimally detecting and managing TBE infections and quality control measures are therefore essential.
OBJECTIVE: To assess the diagnostic quality of laboratories by performing an external quality assurance (EQA) programme for the molecular detection of TBE infections. STUDY
DESIGN: A panel of 12 prepared human plasma samples were distributed and tested for the presence of TBEV-specific RNA. The panel comprised eight samples spiked with different TBEV strains of European, Siberian and Far Eastern subtypes, and included a 10-fold dilution series. Two specificity controls consisted of a sample with Louping ill virus (LIV) and a sample with a pool of four other flaviviruses, and two negative control samples were further included.
RESULTS: Twenty-three laboratories from 16 European and 2 non-European countries participated in this EQA programme. Only two participants correctly identified all samples. Nine laboratories correctly identified 75.0-91.7% of the samples; seven laboratories correctly identified 54.5-66.7% and five laboratories correctly identified < or =50%.
CONCLUSIONS: The EQA programme provides information on the quality of the RT-PCR methods used by the participating laboratories and indicates that most of these need to improve sensitivity and specificity of their molecular assays for TBEV.

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Year:  2006        PMID: 17070730     DOI: 10.1016/j.jcv.2006.09.001

Source DB:  PubMed          Journal:  J Clin Virol        ISSN: 1386-6532            Impact factor:   3.168


  7 in total

1.  High-throughput procedure for tick surveys of tick-borne encephalitis virus and its application in a national surveillance study in Switzerland.

Authors:  Rahel Gäumann; Kathrin Mühlemann; Marc Strasser; Christian M Beuret
Journal:  Appl Environ Microbiol       Date:  2010-05-07       Impact factor: 4.792

2.  Isolation, preliminary characterization, and full-genome analyses of tick-borne encephalitis virus from Mongolia.

Authors:  Stefan Frey; Ilona Mossbrugger; Damdin Altantuul; Jigjav Battsetseg; Rendoo Davaadorj; Damdindorj Tserennorov; Tsoodol Buyanjargal; Dashdavaa Otgonbaatar; Lothar Zöller; Stephanie Speck; Roman Wölfel; Gerhard Dobler; Sandra Essbauer
Journal:  Virus Genes       Date:  2012-07-31       Impact factor: 2.332

3.  Quality control of direct molecular diagnostics for methicillin-resistant Staphylococcus aureus.

Authors:  Alex van Belkum; Hubert G M Niesters; William G MacKay; Willem B van Leeuwen
Journal:  J Clin Microbiol       Date:  2007-06-20       Impact factor: 5.948

4.  Molecular detection of Borrelia burgdorferi sensu lato - An analytical comparison of real-time PCR protocols from five different Scandinavian laboratories.

Authors:  Malin Lager; Maximilian Faller; Peter Wilhelmsson; Vivian Kjelland; Åshild Andreassen; Rimtas Dargis; Hanne Quarsten; Ram Dessau; Volker Fingerle; Gabriele Margos; Sølvi Noraas; Katharina Ornstein; Ann-Cathrine Petersson; Andreas Matussek; Per-Eric Lindgren; Anna J Henningsson
Journal:  PLoS One       Date:  2017-09-22       Impact factor: 3.240

5.  Toscana, West Nile, Usutu and tick-borne encephalitis viruses: external quality assessment for molecular detection of emerging neurotropic viruses in Europe, 2017.

Authors:  Chantal Reusken; Cecile Baronti; Ramona Mögling; Anna Papa; Katrin Leitmeyer; Remi N Charrel
Journal:  Euro Surveill       Date:  2019-12

6.  Development of simple and rapid assay to detect viral RNA of tick-borne encephalitis virus by reverse transcription-loop-mediated isothermal amplification.

Authors:  Daisuke Hayasaka; Kotaro Aoki; Kouichi Morita
Journal:  Virol J       Date:  2013-03-04       Impact factor: 4.099

7.  Vectors, molecular epidemiology and phylogeny of TBEV in Kazakhstan and central Asia.

Authors:  Karlygash Abdiyeva; Nurkeldi Turebekov; Ravilya Yegemberdiyeva; Andrey Dmitrovskiy; Lyazzat Yeraliyeva; Zhanna Shapiyeva; Talgat Nurmakhanov; Yerlan Sansyzbayev; Guenter Froeschl; Michael Hoelscher; Josua Zinner; Sandra Essbauer; Stefan Frey
Journal:  Parasit Vectors       Date:  2020-10-06       Impact factor: 3.876

  7 in total

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