Literature DB >> 17069808

Mapping active site residues in glutamate-5-kinase. The substrate glutamate and the feed-back inhibitor proline bind at overlapping sites.

Isabel Pérez-Arellano1, Vicente Rubio, Javier Cervera.   

Abstract

Glutamate-5-kinase (G5K) catalyzes the controlling first step of proline biosynthesis. Substrate binding, catalysis and feed-back inhibition by proline are functions of the N-terminal approximately 260-residue domain of G5K. We study here the impact on these functions of 14 site-directed mutations affecting 9 residues of Escherichia coli G5K, chosen on the basis of the structure of the bisubstrate complex of the homologous enzyme acetylglutamate kinase (NAGK). The results support the predicted roles of K10, K217 and T169 in catalysis and ATP binding and of D150 in orienting the catalytic lysines. They support the implication of D148 and D150 in glutamate binding and of D148 and N149 in proline binding. Proline increases the S(0.5) for glutamate and appears to bind at a site overlapping with the site for glutamate. We conclude that G5K and NAGK closely resemble each other concerning substrate binding and catalysis, but that they have different mechanisms of feed-back control.

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Year:  2006        PMID: 17069808     DOI: 10.1016/j.febslet.2006.10.031

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  12 in total

1.  Interaction of transcriptional repressor ArgR with transcriptional regulator FarR at the argB promoter region in Corynebacterium glutamicum.

Authors:  Soo Youn Lee; Jae-Min Park; Jin Hyung Lee; Suk-Tai Chang; Jin-Soo Park; Yang-Hoon Kim; Jiho Min
Journal:  Appl Environ Microbiol       Date:  2010-11-29       Impact factor: 4.792

2.  Laboratory evolution of glutathione biosynthesis reveals natural compensatory pathways.

Authors:  Karthik Veeravalli; Dana Boyd; Brent L Iverson; Jon Beckwith; George Georgiou
Journal:  Nat Chem Biol       Date:  2010-12-26       Impact factor: 15.040

3.  Glutamate kinase from Thermotoga maritima: characterization of a thermophilic enzyme for proline biosynthesis.

Authors:  Isabel Pérez-Arellano; Javier Cervera
Journal:  Extremophiles       Date:  2010-06-11       Impact factor: 2.395

4.  Osmotically controlled synthesis of the compatible solute proline is critical for cellular defense of Bacillus subtilis against high osmolarity.

Authors:  Jeanette Brill; Tamara Hoffmann; Monika Bleisteiner; Erhard Bremer
Journal:  J Bacteriol       Date:  2011-07-22       Impact factor: 3.490

5.  Understanding pyrroline-5-carboxylate synthetase deficiency: clinical, molecular, functional, and expression studies, structure-based analysis, and novel therapy with arginine.

Authors:  Diego Martinelli; Johannes Häberle; Vicente Rubio; Cecilia Giunta; Ingrid Hausser; Rosalba Carrozzo; Nadine Gougeard; Clara Marco-Marín; Bianca M Goffredo; Maria Chiara Meschini; Elsa Bevivino; Sara Boenzi; Giovanna Stefania Colafati; Francesco Brancati; Matthias R Baumgartner; Carlo Dionisi-Vici
Journal:  J Inherit Metab Dis       Date:  2011-12-15       Impact factor: 4.982

Review 6.  Pyrroline-5-carboxylate synthase and proline biosynthesis: from osmotolerance to rare metabolic disease.

Authors:  Isabel Pérez-Arellano; Francisco Carmona-Alvarez; Ana I Martínez; Jesús Rodríguez-Díaz; Javier Cervera
Journal:  Protein Sci       Date:  2010-03       Impact factor: 6.725

Review 7.  Substrate channeling in proline metabolism.

Authors:  Benjamin W Arentson; Nikhilesh Sanyal; Donald F Becker
Journal:  Front Biosci (Landmark Ed)       Date:  2012-01-01

8.  CRISPR-Cpf1 assisted genome editing of Corynebacterium glutamicum.

Authors:  Yu Jiang; Fenghui Qian; Junjie Yang; Yingmiao Liu; Feng Dong; Chongmao Xu; Bingbing Sun; Biao Chen; Xiaoshu Xu; Yan Li; Renxiao Wang; Sheng Yang
Journal:  Nat Commun       Date:  2017-05-04       Impact factor: 14.919

9.  Functional properties and structural characterization of rice δ(1)-pyrroline-5-carboxylate reductase.

Authors:  Giuseppe Forlani; Michele Bertazzini; Marco Zarattini; Dietmar Funck; Milosz Ruszkowski; Bogusław Nocek
Journal:  Front Plant Sci       Date:  2015-07-28       Impact factor: 5.753

10.  Characterisation of a putative glutamate 5-kinase from Leishmania donovani.

Authors:  Natasha Sienkiewicz; Han B Ong; Alan H Fairlamb
Journal:  FEBS J       Date:  2018-05-27       Impact factor: 5.542

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