Literature DB >> 17068338

Catalytic site modifications of TAP1 and TAP2 and their functional consequences.

Christopher L Perria1, Vijayalakshmi Rajamanickam, Philip E Lapinski, Malini Raghavan.   

Abstract

The transporter associated with antigen processing (TAP), a member of the ATP binding cassette (ABC) family of transmembrane transporters, transports peptides across the endoplasmic reticulum membrane for assembly of major histocompatibility complex class I molecules. Two subunits, TAP1 and TAP2, are required for peptide transport, and ATP hydrolysis by TAP1.TAP2 complexes is important for transport activity. Two nucleotide binding sites are present in TAP1.TAP2 complexes. Compared with other ABC transporters, the first nucleotide binding site contains non-consensus catalytic site residues, including Asp(668) in the Walker B region of TAP1 (in place of a highly conserved glutamic acid), and Gln(701) in the switch region of TAP1 (in place of a highly conserved histidine). At the second nucleotide binding site, a glutamic acid (TAP2 Glu(632)) follows the Walker B motif, and the switch region contains a histidine (TAP2 His(661)). We found that alterations at Glu(632) and His(661) of TAP2 significantly reduced peptide translocation and/or TAP-induced major histocompatibility complex class I surface expression. Alterations of TAP1 Asp(668) alone or in combination with TAP1 Gln(701) had only small effects on TAP activity. Thus, the naturally occurring Asp(668) and Gln(701) alterations of TAP1 are likely to contribute to attenuated catalytic activity at the first nucleotide binding site (the TAP1 site) of TAP complexes. Due to its enhanced catalytic activity, the second nucleotide binding site (the TAP2 site) appears to be the main site driving peptide transport. A mechanistic model involving one main active site is likely to apply to other ABC transporters that have an asymmetric distribution of catalytic site residues within the two nucleotide binding sites.

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Year:  2006        PMID: 17068338     DOI: 10.1074/jbc.M605492200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  12 in total

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2.  The rules of variation: amino acid exchange according to the rotating circular genetic code.

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3.  The H-loop in the second nucleotide-binding domain of the cystic fibrosis transmembrane conductance regulator is required for efficient chloride channel closing.

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Journal:  Cell Physiol Biochem       Date:  2010-01-12

4.  Asymmetric organelle positioning during epithelial polarization of C. elegans intestinal cells.

Authors:  James N Brandt; Laura Voss; Fiona M Rambo; Katelyn Nicholson; Jackson R Thein; Lydia Fairchild; Laurence Seabrook; Danielia Lewis; Lali Guevara-Hernandez; Matthew L White; Luca Sax; Victoria Eichten; Logan Harper; Greg J Hermann
Journal:  Dev Biol       Date:  2021-09-29       Impact factor: 3.582

Review 5.  MHC class I assembly: out and about.

Authors:  Malini Raghavan; Natasha Del Cid; Syed Monem Rizvi; Larry Robert Peters
Journal:  Trends Immunol       Date:  2008-09       Impact factor: 16.687

6.  Analyses of conformational states of the transporter associated with antigen processing (TAP) protein in a native cellular membrane environment.

Authors:  Jie Geng; Sivaraj Sivaramakrishnan; Malini Raghavan
Journal:  J Biol Chem       Date:  2013-11-06       Impact factor: 5.157

7.  Discovery of regulatory elements in human ATP-binding cassette transporters through expression quantitative trait mapping.

Authors:  P Matsson; S W Yee; S Markova; K Morrissey; G Jenkins; J Xuan; E Jorgenson; D L Kroetz; K M Giacomini
Journal:  Pharmacogenomics J       Date:  2011-03-08       Impact factor: 3.550

8.  Involvement of the carboxyl-terminal region of the yeast peroxisomal half ABC transporter Pxa2p in its interaction with Pxa1p and in transporter function.

Authors:  Cheng-Yi Chuang; Ling-Yun Chen; Ru-Huei Fu; Shih-Ming Chen; Ming-Hua Ho; Jie-Mau Huang; Chia-Chi Hsu; Chien-Cheng Wang; Meng-Shian Chen; Rong-Tzong Tsai
Journal:  PLoS One       Date:  2014-08-13       Impact factor: 3.240

Review 9.  Viral inhibition of the transporter associated with antigen processing (TAP): a striking example of functional convergent evolution.

Authors:  Marieke C Verweij; Daniëlle Horst; Bryan D Griffin; Rutger D Luteijn; Andrew J Davison; Maaike E Ressing; Emmanuel J H J Wiertz
Journal:  PLoS Pathog       Date:  2015-04-16       Impact factor: 6.823

10.  A highly conserved sequence of the viral TAP inhibitor ICP47 is required for freezing of the peptide transport cycle.

Authors:  Tony Matschulla; Richard Berry; Carolin Gerke; Marius Döring; Julia Busch; Jennifer Paijo; Ulrich Kalinke; Frank Momburg; Hartmut Hengel; Anne Halenius
Journal:  Sci Rep       Date:  2017-06-07       Impact factor: 4.379

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