Literature DB >> 17060903

Modelling data across labs, genomes, space and time.

Jason R Swedlow1, Suzanna E Lewis, Ilya G Goldberg.   

Abstract

Logical models and physical specifications provide the foundation for storage, management and analysis of complex sets of data, and describe the relationships between measured data elements and metadata - the contextual descriptors that define the primary data. Here, we use imaging applications to illustrate the purpose of the various implementations of data specifications and the requirement for open, standardized, data formats to facilitate the sharing of critical digital data and metadata.

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Year:  2006        PMID: 17060903     DOI: 10.1038/ncb1496

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.824


  7 in total

Review 1.  Network integration and graph analysis in mammalian molecular systems biology.

Authors:  A Ma'ayan
Journal:  IET Syst Biol       Date:  2008-09       Impact factor: 1.615

Review 2.  Multiscale modeling for biologists.

Authors:  Martin Meier-Schellersheim; Iain D C Fraser; Frederick Klauschen
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2009 Jul-Aug

Review 3.  How many molecular subtypes? Implications of the unique tumor principle in personalized medicine.

Authors:  Shuji Ogino; Charles S Fuchs; Edward Giovannucci
Journal:  Expert Rev Mol Diagn       Date:  2012-07       Impact factor: 5.225

4.  Using systems biology approaches to understand cardiac inflammation and extracellular matrix remodeling in the setting of myocardial infarction.

Authors:  Omid Ghasemi; Yonggang Ma; Merry L Lindsey; Yu-Fang Jin
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2014 Jan-Feb

5.  Systems medicine: the future of medical genomics and healthcare.

Authors:  Charles Auffray; Zhu Chen; Leroy Hood
Journal:  Genome Med       Date:  2009-01-20       Impact factor: 11.117

6.  Using semantic web technologies to annotate and align microarray designs.

Authors:  Sebastian Szpakowski; James McCusker; Michael Krauthammer
Journal:  Cancer Inform       Date:  2009-05-13

7.  Rule-based knowledge aggregation for large-scale protein sequence analysis of influenza A viruses.

Authors:  Olivo Miotto; Tin Wee Tan; Vladimir Brusic
Journal:  BMC Bioinformatics       Date:  2008       Impact factor: 3.169

  7 in total

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