Literature DB >> 17056022

Complete assignment of hyaluronan oligosaccharides up to hexasaccharides.

Charles D Blundell1, Michelle A C Reed, Andrew Almond.   

Abstract

The glycosaminoglycan hyaluronan is involved in a diverse range of physiological and diseases processes and comprises repeated disaccharide units of N-acetyl-d-glucosamine (GlcNAc) and d-glucuronic acid (GlcA). A molecular description of the solution conformation of HA is required to account for this biology, which is best attained using nuclear magnetic resonance (NMR). NMR studies of the polymer, however, are frustrated by resonance overlap arising from the highly degenerate structure. In contrast, end-effects in oligosaccharides can produce some chemical shift dispersion, giving the possibility that their conformational properties can be measured and extrapolated to models of the polymer. We report the complete resolution and assignment of (1)H, (13)C and (15)N nuclei in hyaluronan oligosaccharides with seven different naturally occurring terminal rings. At 900MHz, all (1)H nuclei in the hexasaccharide GlcA-beta-(1-->3)-GlcNAc-beta-(1-->4)-GlcA-beta-(1-->3)-GlcNAc-beta-(1-->4)-GlcA-beta-(1-->3)-GlcNAc-OH were uniquely resolved and the two central rings were found to be a good model for the polymer environment. These assignments now allow resolved, unambiguous structural restraints to be acquired on this oligosaccharide and extrapolated to models for the solution conformation of the polymer.

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Year:  2006        PMID: 17056022     DOI: 10.1016/j.carres.2006.09.023

Source DB:  PubMed          Journal:  Carbohydr Res        ISSN: 0008-6215            Impact factor:   2.104


  9 in total

1.  Serum lipidomics in diagnostics of sarcoidosis.

Authors:  Beata Toczylowska; Dariusz Jastrzebski; Sabina Kostorz; Elzbieta Zieminska; Dariusz Ziora
Journal:  Sarcoidosis Vasc Diffuse Lung Dis       Date:  2018-04-28       Impact factor: 0.670

2.  Preparation and application of a 'clickable' acceptor for enzymatic synthesis of heparin oligosaccharides.

Authors:  Chao Cai; Kristi Edgar; Jian Liu; Robert J Linhardt
Journal:  Carbohydr Res       Date:  2013-03-01       Impact factor: 2.104

3.  Tandem MS can distinguish hyaluronic acid from N-acetylheparosan.

Authors:  Zhenqing Zhang; Jin Xie; Jian Liu; Robert J Linhardt
Journal:  J Am Soc Mass Spectrom       Date:  2007-10-30       Impact factor: 3.109

4.  The structural plasticity of heparan sulfate NA-domains and hence their role in mediating multivalent interactions is confirmed by high-accuracy (15)N-NMR relaxation studies.

Authors:  Mehdi Mobli; Mathias Nilsson; Andrew Almond
Journal:  Glycoconj J       Date:  2007-12-13       Impact factor: 2.916

5.  Quantification of free ligand conformational preferences by NMR and their relationship to the bioactive conformation.

Authors:  Charles D Blundell; Martin J Packer; Andrew Almond
Journal:  Bioorg Med Chem       Date:  2013-07-03       Impact factor: 3.641

6.  A 3D-structural model of unsulfated chondroitin from high-field NMR: 4-sulfation has little effect on backbone conformation.

Authors:  Benedict M Sattelle; Javad Shakeri; Ian S Roberts; Andrew Almond
Journal:  Carbohydr Res       Date:  2009-11-23       Impact factor: 2.104

7.  Isolation and Characterization of Polysaccharides from the Ascidian Styela clava.

Authors:  Jesus Valcarcel; José Antonio Vázquez; Uxía R Varela; Rui L Reis; Ramon Novoa-Carballal
Journal:  Polymers (Basel)       Date:  2021-12-22       Impact factor: 4.329

Review 8.  Chemical Modification of Hyaluronan and Their Biomedical Applications.

Authors:  Vera Hintze; Matthias Schnabelrauch; Sandra Rother
Journal:  Front Chem       Date:  2022-02-11       Impact factor: 5.221

9.  The effects of exercise training on lipid profile in patients with sarcoidosis.

Authors:  Dariusz Jastrzebski; Beata Toczylowska; Elzbieta Zieminska; Aleksandra Zebrowska; Sabina Kostorz-Nosal; Elzbieta Swietochowska; Camillo Di Giulio; Dariusz Ziora
Journal:  Sci Rep       Date:  2021-03-10       Impact factor: 4.379

  9 in total

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