Literature DB >> 17052115

Uncovering directional sensing: where are we headed?

J Krishnan1, P A Iglesias.   

Abstract

We survey aspects of directional sensing, i.e. how a cell interprets differences in the external concentration of a chemoattractant to guide its motion, from the perspective of systems biology. We focus on questions that need to be addressed using a combination of modelling and experimental approaches. After briefly summarising the ideas underlying recent modelling efforts, we discuss a variety of experimental questions which are motivated by these models. Some of these questions focus on basic features of the chemotactic response, without involving much biochemistry, while others focus on filling some of the gaps in the biochemistry, which have been brought to light by the models. The emphasis is on systematic quantitative experiments that will unambiguously resolve many of these issues. Finally, we describe some current challenges for theoretical modelling and survey some of the theoretical tools and approaches employed to model the chemotaxis pathways.

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Year:  2004        PMID: 17052115     DOI: 10.1049/sb:20045001

Source DB:  PubMed          Journal:  Syst Biol (Stevenage)        ISSN: 1741-2471


  7 in total

1.  Mathematical analysis of steady-state solutions in compartment and continuum models of cell polarization.

Authors:  Zhenzhen Zheng; Ching-Shan Chou; Tau-Mu Yi; Qing Nie
Journal:  Math Biosci Eng       Date:  2011-10-01       Impact factor: 2.080

2.  Wave-pinning and cell polarity from a bistable reaction-diffusion system.

Authors:  Yoichiro Mori; Alexandra Jilkine; Leah Edelstein-Keshet
Journal:  Biophys J       Date:  2008-01-22       Impact factor: 4.033

3.  Phosphoinositides and Rho proteins spatially regulate actin polymerization to initiate and maintain directed movement in a one-dimensional model of a motile cell.

Authors:  Adriana T Dawes; Leah Edelstein-Keshet
Journal:  Biophys J       Date:  2006-11-10       Impact factor: 4.033

4.  Modeling the role of homologous receptor desensitization in cell gradient sensing.

Authors:  Francis Lin; Eugene C Butcher
Journal:  J Immunol       Date:  2008-12-15       Impact factor: 5.422

5.  Modeling robustness tradeoffs in yeast cell polarization induced by spatial gradients.

Authors:  Ching-Shan Chou; Qing Nie; Tau-Mu Yi
Journal:  PLoS One       Date:  2008-09-01       Impact factor: 3.240

6.  How cells integrate complex stimuli: the effect of feedback from phosphoinositides and cell shape on cell polarization and motility.

Authors:  Athanasius F M Marée; Verônica A Grieneisen; Leah Edelstein-Keshet
Journal:  PLoS Comput Biol       Date:  2012-03-01       Impact factor: 4.475

7.  Spatial stochastic dynamics enable robust cell polarization.

Authors:  Michael J Lawson; Brian Drawert; Mustafa Khammash; Linda Petzold; Tau-Mu Yi
Journal:  PLoS Comput Biol       Date:  2013-07-25       Impact factor: 4.475

  7 in total

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