Literature DB >> 17051693

Simulation and sensitivity analysis of phosphorylation of EGFR signal transduction pathway in PC12 cell model.

C V Suresh Babu1, S Yoon, H S Nam, Y S Yoo.   

Abstract

The epidermal growth factor receptor (EGFR) signalling pathway is a complex signalling process with a wide network of interactions. The activation of the mitogen-activated protein kinases (MAPKs) cascade by this activated EGFR has been well studied. MAPKs form a highly integrated network, which is essential for certain specialised cell functions. This paper presents a kinetic model for the MAPK pathway downstream of the EGFR using a biochemical simulator. The model includes 30 signalling events and 29 signalling molecules. The time course data were examined for the activation of each signalling component. The simulation provides a large volume of data, by monitoring the kinetics of the signalling components, which were compared experimentally using the PC12 cell line. The kinetic model corresponded well with the experimental results observed in the EGFR induced activation of proteins. An examination of the kinetic analysis of the multiple signalling events provides a quantitative framework for representing the EGFR signalling network.

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Year:  2004        PMID: 17051693     DOI: 10.1049/sb:20045023

Source DB:  PubMed          Journal:  Syst Biol (Stevenage)        ISSN: 1741-2471


  5 in total

Review 1.  Computational modelling of the receptor-tyrosine-kinase-activated MAPK pathway.

Authors:  Richard J Orton; Oliver E Sturm; Vladislav Vyshemirsky; Muffy Calder; David R Gilbert; Walter Kolch
Journal:  Biochem J       Date:  2005-12-01       Impact factor: 3.857

2.  Simplification of stochastic chemical reaction models with fast and slow dynamics.

Authors:  Guang Qiang Dong; Luke Jakobowski; Marco A J Iafolla; David R McMillen
Journal:  J Biol Phys       Date:  2007-09-05       Impact factor: 1.365

3.  Systematic reduction of a stochastic signalling cascade model.

Authors:  Colin Guangqiang Dong; Luke Jakobowski; David R McMillen
Journal:  J Biol Phys       Date:  2006-04-20       Impact factor: 1.365

4.  A formal model for analyzing drug combination effects and its application in TNF-alpha-induced NFkappaB pathway.

Authors:  Han Yan; Bo Zhang; Shao Li; Qianchuan Zhao
Journal:  BMC Syst Biol       Date:  2010-04-25

5.  Stochastic model of ERK-mediated progesterone receptor translocation, clustering and transcriptional activity.

Authors:  Tatiana T Marquez-Lago; Stanly Steinberg
Journal:  Sci Rep       Date:  2022-07-11       Impact factor: 4.996

  5 in total

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